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49 Open 191 Closed
49 Open 191 Closed
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Issues list

Reference of Metagenome in MetaT related yamls
#388 opened Feb 20, 2025 by kaijli
Update ReadsQC to v1.0.15
#387 opened Feb 19, 2025 by vlilanl
3 tasks
import-projects failing with 404 at api.find_data_objects
#386 opened Feb 18, 2025 by mbthornton-lbl
@mbthornton-lbl
Remove unneeded files function not working properly
#381 opened Feb 12, 2025 by aclum
@mflynn-lanl
Investigate issues getting new project set up and tests running
#379 opened Feb 7, 2025 by mbthornton-lbl
@mflynn-lanl @kaijli
@AmitBinf @mbthornton-lbl @vlilanl
1
Implement JawsRunner job status and metadata methods
#374 opened Feb 5, 2025 by mbthornton-lbl
@mbthornton-lbl
Implement JawsRunner submit_job method
#373 opened Feb 5, 2025 by mbthornton-lbl
@mbthornton-lbl
Implement JawsRunner
#372 opened Feb 5, 2025 by mbthornton-lbl
@mbthornton-lbl
Validate NMDC JAT Templates Through Test Ingestion
#367 opened Jan 28, 2025 by Shalsh23
9 tasks
@Shalsh23
1
Develop JAT templates
#366 opened Jan 28, 2025 by Shalsh23
@Shalsh23
3
Update README for running Watcher and Scheduler
#362 opened Jan 24, 2025 by mbthornton-lbl
1
@mbthornton-lbl
1
[FEATURE] Implement Automated NMDC Workflow Data Ingestion Pipeline for JAMO
#365 opened Jan 23, 2025 by Shalsh23
16 tasks
@Shalsh23
variables not evaluating for data object descriptions for readqc
#357 opened Jan 22, 2025 by aclum
@mbthornton-lbl
1
Run NEON sample end to end in Dev
#355 opened Jan 21, 2025 by mbthornton-lbl
1
@mbthornton-lbl @vlilanl
17
Implement Re-submit functionality
#350 opened Jan 14, 2025 by mbthornton-lbl
@mbthornton-lbl
add support for import automation ingest of semibin results
#343 opened Jan 9, 2025 by aclum
file staging should make tsv file for import automation priority-high
#340 opened Jan 7, 2025 by aclum
@mflynn-lanl
3
import automation not working from an interactive node
#331 opened Dec 10, 2024 by aclum
import automation DataObject descriptions should be populated with WorkflowExecution identifier
#330 opened Dec 10, 2024 by aclum
@mbthornton-lbl
Scheduler fails with Mongo server timeout error
#321 opened Dec 5, 2024 by mbthornton-lbl
@mbthornton-lbl
1
Alter jgi_file_staging.py to group sequence_ids
#314 opened Dec 3, 2024 by mflynn-lanl
@mflynn-lanl
update scheduler shell script and add to repo
#302 opened Nov 25, 2024 by mbthornton-lbl
@mbthornton-lbl
support manifest_set records
#299 opened Nov 22, 2024 by aclum
MagsAnalysis import automation when no bins present import
#276 opened Oct 18, 2024 by aclum
berkeley add data_category to workflow automation records berkeley-rollout-post-mvp-eligible does not block rolling out the MVP, still targeted for Oct
#266 opened Oct 8, 2024 by aclum
@mbthornton-lbl
ProTip! Adding no:label will show everything without a label.