Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Alter jgi_file_staging.py to group sequence_ids #314

Open
mflynn-lanl opened this issue Dec 3, 2024 · 0 comments
Open

Alter jgi_file_staging.py to group sequence_ids #314

mflynn-lanl opened this issue Dec 3, 2024 · 0 comments
Assignees

Comments

@mflynn-lanl
Copy link
Collaborator

Originally, calls to the API endpoint https://files.jgi.doe.gov/search/?q={sequencing_id}&f=project_id&a=false&h=false&d=asc&p=1&x=10&api_version=2 were done one-by-one. However, they were stalling after 50-100 calls; The calls succeeded and then would just hang forever. I am re-writing the code to group the sequence id's so fewer calls are necessary

@mflynn-lanl mflynn-lanl self-assigned this Dec 3, 2024
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

1 participant