unify parameters for tree addons (#71)

* unify parameters for tree addons

* black

* unify parameter names and defaults, unify v.trees.species

* generalize default values, add messages

grass-gis-addons/m.analyse.trees/r.trees.mlapply.worker/r.trees.mlapply.worker.py

@@ -38,6 +38,14 @@
 # % description: Input natural tiles as vector map
 # %end
 
+# %option
+# % key: new_mapset
+# % type: string
+# % required: yes
+# % key_desc: name
+# % description: Name for new mapset
+# %end
+
 # %option G_OPT_I_GROUP
 # % key: group
 # % multiple: no
@@ -56,14 +64,6 @@
 # % description: Name of classified output raster map
 # %end
 
-# %option
-# % key: new_mapset
-# % type: string
-# % required: yes
-# % key_desc: name
-# % description: Name for new mapset
-# %end
-
 import sys
 import os
 

grass-gis-addons/m.analyse.trees/r.trees.mlapply/r.trees.mlapply.py

@@ -4,7 +4,7 @@
 #
 # MODULE:       r.trees.mlapply
 #
-# AUTHOR(S):    Julia Haas, Markus Metz, Lina Krisztian
+# AUTHOR(S):    Markus Metz, Lina Krisztian, Julia Haas
 #
 # PURPOSE:      Applies the tree classification model in parallel to the
 #               current region
@@ -36,24 +36,28 @@
 # %option G_OPT_V_INPUT
 # % key: area
 # % label: Name of vector defining area of interest
+# % answer: study_area
 # % guisection: Input
 # %end
 
 # %option G_OPT_I_GROUP
 # % key: group
 # % label: Name of input group
+# % answer: ml_input
 # % guisection: Input
 # %end
 
 # %option G_OPT_F_INPUT
 # % key: model
 # % label: Name of input model file
+# % answer: ml_trees_randomforest.gz
 # % guisection: Input
 # %end
 
 # %option G_OPT_R_OUTPUT
 # % key: output
 # % label: Name of classified output raster map
+# % answer: tree_pixels
 # % guisection: Output
 # %end
 
@@ -67,8 +71,8 @@
 # % key: tile_size
 # % type: double
 # % required: no
-# % answer: 1000
 # % label: Edge length of grid tiles in map units for parallel processing
+# % answer: 1000
 # % guisection: Parallel processing
 # %end
 

grass-gis-addons/m.analyse.trees/r.trees.mltrain/r.trees.mltrain.py

@@ -27,64 +27,64 @@
 
 # %option G_OPT_R_INPUT
 # % key: red_raster
-# % required: yes
-# % label: Name of the red band
+# % label: Name of the red raster
+# % answer: top_red_02
 # % guisection: Input
 # %end
 
 # %option G_OPT_R_INPUT
 # % key: green_raster
-# % required: yes
-# % label: Name of the green band
+# % label: Name of the green raster
+# % answer: top_green_02
 # % guisection: Input
 # %end
 
 # %option G_OPT_R_INPUT
 # % key: blue_raster
-# % required: yes
-# % label: Name of the blue band
+# % label: Name of the blue raster
+# % answer: top_blue_02
 # % guisection: Input
 # %end
 
 # %option G_OPT_R_INPUT
 # % key: nir_raster
-# % required: yes
 # % label: Name of the NIR raster
+# % answer: top_nir_02
 # % guisection: Input
 # %end
 
 # %option G_OPT_R_INPUT
 # % key: ndvi_raster
-# % required: yes
 # % label: Name of the NDVI raster
+# % answer: top_ndvi_02
 # % guisection: Input
 # %end
 
 # %option G_OPT_R_INPUT
 # % key: ndsm
-# % required: yes
 # % label: Name of the nDSM raster
+# % answer: ndsm
 # % guisection: Input
 # %end
 
 # %option G_OPT_R_INPUT
 # % key: slope
-# % required: yes
 # % label: Name of the nDSM slope raster
+# % answer: ndsm_slope
 # % guisection: Input
 # %end
 
 # %option G_OPT_R_INPUT
 # % key: nearest
-# % required: yes
 # % label: Name of raster with nearest peak IDs
+# % answer: nearest_tree
 # % guisection: Input
 # %end
 
 # %option G_OPT_R_INPUT
 # % key: peaks
-# % required: yes
 # % label: Name of raster with peaks and ridges
+# % answer: tree_peaks
 # % guisection: Input
 # %end
 
@@ -102,67 +102,66 @@
 # % guisection: Optional input
 # %end
 
-
 # %option
 # % key: ndvi_threshold
 # % type: double
-# % required: no
-# % label: Define NDVI threshold for potential trees
+# % required: yes
+# % label: NDVI threshold for potential trees
 # % answer: 130
 # % guisection: Parameters
 # %end
 
 # %option
 # % key: nir_threshold
 # % type: double
-# % required: no
-# % label: Define NIR threshold for potential trees
+# % required: yes
+# % label: NIR threshold for potential trees
 # % answer: 130
 # % guisection: Parameters
 # %end
 
 # %option
 # % key: ndsm_threshold
 # % type: double
-# % required: no
-# % label: Define nDSM threshold for potential trees
+# % required: yes
+# % label: nDSM threshold for potential trees
 # % answer: 1
 # % guisection: Parameters
 # %end
 
 # %option
 # % key: slopep75_threshold
 # % type: double
-# % required: no
-# % label: Define threshold for 75 percentile of slope for potential trees
+# % required: yes
+# % label: Threshold for 75 percentile of slope for potential trees
 # % answer: 70
 # % guisection: Parameters
 # %end
 
 # %option
 # % key: area_threshold
 # % type: double
-# % required: no
-# % label: Define area size threshold for potential trees
+# % required: yes
+# % label: Area size threshold for potential trees
 # % answer: 5
 # % guisection: Parameters
 # %end
 
 # %option
 # % key: group
 # % type: string
-# % required: no
-# % answer: ml_input
+# % required: yes
 # % gisprompt: new,group,group
 # % label: Name of output imagery group
+# % answer: ml_input
 # % guisection: Output
 # %end
 
 # %option G_OPT_F_OUTPUT
 # % key: save_model
 # % label: Save model to file (for compression use e.g. '.gz' extension)
 # % description: Name of file to store model results using python joblib
-# % required: yes
+# % answer: ml_trees_randomforest.gz
 # % guisection: Output
 # %end
 

grass-gis-addons/m.analyse.trees/r.trees.peaks/r.trees.peaks.py

@@ -25,36 +25,33 @@
 # % keyword: trees analysis
 # %end
 
+# %option G_OPT_V_INPUT
+# % key: area
+# % required: yes
+# % label: Name of vector defining area of interest
+# % answer: study_area
+# % guisection: Optional input
+# %end
+
 # %option G_OPT_R_INPUT
 # % key: ndsm
-# % type: string
-# % required: yes
 # % multiple: no
 # % label: Name of the nDSM raster
+# % answer: ndsm
 # % guisection: Input
 # %end
 
-# %option G_OPT_V_INPUT
-# % key: area
-# % answer: study_area
-# % required: no
-# % label: Name of vector defining area of interest
-# % guisection: Optional input
-# %end
-
 # %option
 # % key: forms_res
 # % type: double
-# % required: no
+# % required: yes
 # % label: Resolution to use for forms detection
 # % answer: 0.8
 # % guisection: Optional input
 # %end
 
-
 # %option G_OPT_R_OUTPUT
 # % key: nearest
-# % required: yes
 # % multiple: no
 # % label: Output raster map with ID of nearest tree
 # % answer: nearest_tree
@@ -63,17 +60,17 @@
 
 # %option G_OPT_R_OUTPUT
 # % key: peaks
-# % required: yes
 # % multiple: no
 # % label: Output raster map with peaks and ridges
+# % answer: tree_peaks
 # % guisection: Output
 # %end
 
 # %option G_OPT_R_OUTPUT
 # % key: slope
-# % required: yes
 # % multiple: no
 # % label: Output raster map with nDSM slope
+# % answer: ndsm_slope
 # % guisection: Output
 # %end
 
@@ -91,8 +88,8 @@
 # % key: tile_size
 # % type: double
 # % required: no
-# % answer: 2000
 # % label: Edge length of grid tiles in map units for parallel processing
+# % answer: 2000
 # % guisection: Parallel processing
 # %end