Most of the works in this repository, especially the R scripts, should
be directly reproducible. You’ll need
git,
R,
quarto, and more conveniently
RStudio IDE installed and running well in
your system. You simply need to fork/clone this repository using RStudio
by following this tutorial, start right away from
Step 2.
Using terminal in linux/MacOS, you can issue the following command:
quarto tools install tinytex
This command will install tinytex in your path, which is required to
compile quarto documents as latex/pdf. Afterwards, in your RStudio
command line, you can copy paste the following code to setup your
working directory:
install.packages("renv") # Only need to run this step if `renv` is not installed
This step will install renv package, which will help you set up the
R environment. Please note that renv helps tracking, versioning, and
updating packages I used throughout the analysis.
renv::restore()
renv::settings$snapshot.type("all")
This step will read renv.lock file and install required packages to
your local machine. When all packages loaded properly (make sure there’s
no error at all), you have to restart your R session. Setting the
snapshot to all will allow renv to track all the required packages,
including its dependencies. After restarting your R session, you should
be able to proceed with:
targets::tar_make()
This step will read _targets.R file, where I systematically draft all
of the analysis steps. Once it’s done running, you will find the
rendered document (either in html or pdf) inside the draft
directory.
This is the analysis pipeline for conducting analysis in an umbrella
review. The complete flow can be viewed in the following mermaid
diagram:
graph LR
subgraph legend
direction LR
x7420bd9270f8d27d([""Up to date""]):::uptodate --- x0a52b03877696646([""Outdated""]):::outdated
x0a52b03877696646([""Outdated""]):::outdated --- x5b3426b4c7fa7dbc([""Started""]):::started
x5b3426b4c7fa7dbc([""Started""]):::started --- xbf4603d6c2c2ad6b([""Stem""]):::none
xbf4603d6c2c2ad6b([""Stem""]):::none --- xf0bce276fe2b9d3e>""Function""]:::none
xf0bce276fe2b9d3e>""Function""]:::none --- x5bffbffeae195fc9{{""Object""}}:::none
end
subgraph Graph
direction LR
x3e42f6670cc1974c>"finder"]:::uptodate --> x8a64dc026076b147>"calcTE"]:::uptodate
x3e42f6670cc1974c>"finder"]:::uptodate --> x2405da16054f81ad>"calcSE"]:::uptodate
x8a64dc026076b147>"calcTE"]:::uptodate --> x19d56b95df0a7e85>"poolES"]:::uptodate
x97296012062236b1>"getPval"]:::uptodate --> x275ceffe01854d89>"reportMeta"]:::uptodate
x4e142918b401f034>"cleanData"]:::uptodate --> xb4a3d4a2fc7bb7d2>"readData"]:::uptodate
x6296d492a8ddad2b>"getCI"]:::uptodate --> x67d7e85e85ed33db>"reportCI"]:::uptodate
x6296d492a8ddad2b>"getCI"]:::uptodate --> x275ceffe01854d89>"reportMeta"]:::uptodate
xb7940ee18a25ecab>"isAnomaly"]:::uptodate --> x4cfdc4b8ffc0833b>"deduplicate"]:::uptodate
x67d7e85e85ed33db>"reportCI"]:::uptodate --> x275ceffe01854d89>"reportMeta"]:::uptodate
x19d56b95df0a7e85>"poolES"]:::uptodate --> xee61ab83b7d675c1>"iterate"]:::uptodate
x1f5f4b5b2ec59cf0>"iterateReport"]:::uptodate --> xe507bce80d611fab>"mkReport"]:::uptodate
x2405da16054f81ad>"calcSE"]:::uptodate --> x19d56b95df0a7e85>"poolES"]:::uptodate
x275ceffe01854d89>"reportMeta"]:::uptodate --> x1f5f4b5b2ec59cf0>"iterateReport"]:::uptodate
x275ceffe01854d89>"reportMeta"]:::uptodate --> x5dec9390e6ba0601(["meta_subgroup_trim_nodrop"]):::uptodate
x6c4c882d7c3ded46(["subgroup_trim_nodrop"]):::uptodate --> x5dec9390e6ba0601(["meta_subgroup_trim_nodrop"]):::uptodate
x07c0a25d8d1269ae(["tbl_clean"]):::uptodate --> x71be6fd42761e6d3(["plt_pair_clean"]):::uptodate
xb5a1412177d32e97>"vizPair"]:::uptodate --> x71be6fd42761e6d3(["plt_pair_clean"]):::uptodate
x543688e28a1fc6f2>"fitSubgroup"]:::uptodate --> x1dce5ca2184cbbac(["subgroup_sub"]):::uptodate
xe37aeeab4f19d257{{"itergroup"}}:::uptodate --> x1dce5ca2184cbbac(["subgroup_sub"]):::uptodate
xcfebc4d08e3ac7e1(["pooled_sub"]):::uptodate --> x1dce5ca2184cbbac(["subgroup_sub"]):::uptodate
x6cab7297675953ab>"fitRegression"]:::uptodate --> xf54d595d36ddf944(["meta_reg_sub_glmm"]):::uptodate
xbd40d4173cdcd2f2(["pooled_sub_glmm"]):::uptodate --> xf54d595d36ddf944(["meta_reg_sub_glmm"]):::uptodate
x19d56b95df0a7e85>"poolES"]:::uptodate --> x2f8e058a4c200eca(["pooled_glmm"]):::uptodate
x07c0a25d8d1269ae(["tbl_clean"]):::uptodate --> x2f8e058a4c200eca(["pooled_glmm"]):::uptodate
x275ceffe01854d89>"reportMeta"]:::uptodate --> x4d2b1e28eb09428e(["meta_subgroup_sub"]):::uptodate
x1dce5ca2184cbbac(["subgroup_sub"]):::uptodate --> x4d2b1e28eb09428e(["meta_subgroup_sub"]):::uptodate
x8fc76a8f0c4f8433(["meta_reg_nodrop"]):::uptodate --> x5829432146e81511(["plt_metareg_nodrop"]):::outdated
xb8df53a3923736a6>"vizMetareg"]:::uptodate --> x5829432146e81511(["plt_metareg_nodrop"]):::outdated
x275ceffe01854d89>"reportMeta"]:::uptodate --> x6fe128cf3d613e50(["meta_subgroup_nodrop"]):::uptodate
xa6d646770fa86dd5(["subgroup_nodrop"]):::uptodate --> x6fe128cf3d613e50(["meta_subgroup_nodrop"]):::uptodate
x543688e28a1fc6f2>"fitSubgroup"]:::uptodate --> x97078af44030bc70(["subgroup_analysis"]):::uptodate
xe37aeeab4f19d257{{"itergroup"}}:::uptodate --> x97078af44030bc70(["subgroup_analysis"]):::uptodate
x0c55547544d10beb(["pooled_all"]):::uptodate --> x97078af44030bc70(["subgroup_analysis"]):::uptodate
x6cab7297675953ab>"fitRegression"]:::uptodate --> x272cc93b628f8f53(["meta_reg_trim"]):::uptodate
x16f58f5592cc23f2(["pooled_trim"]):::uptodate --> x272cc93b628f8f53(["meta_reg_trim"]):::uptodate
xee61ab83b7d675c1>"iterate"]:::uptodate --> x631988a8d3d85fb3(["pooled_author"]):::uptodate
xe797a538520c914d(["tbl"]):::uptodate --> x631988a8d3d85fb3(["pooled_author"]):::uptodate
x43a0cd95af269145(["meta_reg_glmm"]):::uptodate --> xacc055f19d077ef7(["plt_metareg_glmm"]):::outdated
xb8df53a3923736a6>"vizMetareg"]:::uptodate --> xacc055f19d077ef7(["plt_metareg_glmm"]):::outdated
x543688e28a1fc6f2>"fitSubgroup"]:::uptodate --> xf987bdcb9b4a89cb(["subgroup_trim_glmm"]):::uptodate
xe37aeeab4f19d257{{"itergroup"}}:::uptodate --> xf987bdcb9b4a89cb(["subgroup_trim_glmm"]):::uptodate
x6c2a68b24919816c(["pooled_trim_glmm"]):::uptodate --> xf987bdcb9b4a89cb(["subgroup_trim_glmm"]):::uptodate
xee61ab83b7d675c1>"iterate"]:::uptodate --> xe9e91f34f1a53922(["pooled_groups_nodrop"]):::uptodate
xe37aeeab4f19d257{{"itergroup"}}:::uptodate --> xe9e91f34f1a53922(["pooled_groups_nodrop"]):::uptodate
x07c0a25d8d1269ae(["tbl_clean"]):::uptodate --> xe9e91f34f1a53922(["pooled_groups_nodrop"]):::uptodate
xc97dd3bb2801d8e6(["meta_reg_nodrop_glmm"]):::uptodate --> xe056c64a94e73bd1(["plt_metareg_nodrop_glmm"]):::outdated
xb8df53a3923736a6>"vizMetareg"]:::uptodate --> xe056c64a94e73bd1(["plt_metareg_nodrop_glmm"]):::outdated
x2f8e058a4c200eca(["pooled_glmm"]):::uptodate --> x372094126e882570(["meta_glmm"]):::uptodate
x275ceffe01854d89>"reportMeta"]:::uptodate --> x372094126e882570(["meta_glmm"]):::uptodate
x3b47b6779afe85cb(["meta_reg"]):::uptodate --> x85d32e8dea63783a(["plt_metareg"]):::outdated
xb8df53a3923736a6>"vizMetareg"]:::uptodate --> x85d32e8dea63783a(["plt_metareg"]):::outdated
xc573754fb982f8cc(["pooled_trim_nodrop"]):::uptodate --> x072da2b9dadd30d7(["meta_trim_nodrop"]):::uptodate
x275ceffe01854d89>"reportMeta"]:::uptodate --> x072da2b9dadd30d7(["meta_trim_nodrop"]):::uptodate
x272cc93b628f8f53(["meta_reg_trim"]):::uptodate --> xd00ed331109076e5(["plt_metareg_trim"]):::outdated
xb8df53a3923736a6>"vizMetareg"]:::uptodate --> xd00ed331109076e5(["plt_metareg_trim"]):::outdated
x543688e28a1fc6f2>"fitSubgroup"]:::uptodate --> x0faa046694306504(["subgroup_sub_glmm"]):::uptodate
xe37aeeab4f19d257{{"itergroup"}}:::uptodate --> x0faa046694306504(["subgroup_sub_glmm"]):::uptodate
xbd40d4173cdcd2f2(["pooled_sub_glmm"]):::uptodate --> x0faa046694306504(["subgroup_sub_glmm"]):::uptodate
xe507bce80d611fab>"mkReport"]:::uptodate --> x7cddcc2458aa2f2a(["bias_eda"]):::uptodate
x5622303d0fb3e0ca(["pooled_groups"]):::uptodate --> x7cddcc2458aa2f2a(["bias_eda"]):::uptodate
x4cfdc4b8ffc0833b>"deduplicate"]:::uptodate --> x07c0a25d8d1269ae(["tbl_clean"]):::uptodate
xe797a538520c914d(["tbl"]):::uptodate --> x07c0a25d8d1269ae(["tbl_clean"]):::uptodate
x543688e28a1fc6f2>"fitSubgroup"]:::uptodate --> x6c4c882d7c3ded46(["subgroup_trim_nodrop"]):::uptodate
xe37aeeab4f19d257{{"itergroup"}}:::uptodate --> x6c4c882d7c3ded46(["subgroup_trim_nodrop"]):::uptodate
xc573754fb982f8cc(["pooled_trim_nodrop"]):::uptodate --> x6c4c882d7c3ded46(["subgroup_trim_nodrop"]):::uptodate
x6cab7297675953ab>"fitRegression"]:::uptodate --> x3f7928f8d55f3ece(["meta_reg_trim_glmm"]):::uptodate
x6c2a68b24919816c(["pooled_trim_glmm"]):::uptodate --> x3f7928f8d55f3ece(["meta_reg_trim_glmm"]):::uptodate
xd0cd0def3066ae2a>"mergeGBD"]:::uptodate --> x42ecac41dddf0580(["tbl_merge"]):::uptodate
x07c0a25d8d1269ae(["tbl_clean"]):::uptodate --> x42ecac41dddf0580(["tbl_merge"]):::uptodate
x0d85e8aa1f7733e8(["tbl_gbd"]):::uptodate --> x42ecac41dddf0580(["tbl_merge"]):::uptodate
x6cab7297675953ab>"fitRegression"]:::uptodate --> x43a0cd95af269145(["meta_reg_glmm"]):::uptodate
x2f8e058a4c200eca(["pooled_glmm"]):::uptodate --> x43a0cd95af269145(["meta_reg_glmm"]):::uptodate
x6cab7297675953ab>"fitRegression"]:::uptodate --> xc97dd3bb2801d8e6(["meta_reg_nodrop_glmm"]):::uptodate
x4e7a69155c31511d(["pooled_nodrop_glmm"]):::uptodate --> xc97dd3bb2801d8e6(["meta_reg_nodrop_glmm"]):::uptodate
x19d56b95df0a7e85>"poolES"]:::uptodate --> x4e7a69155c31511d(["pooled_nodrop_glmm"]):::uptodate
x07c0a25d8d1269ae(["tbl_clean"]):::uptodate --> x4e7a69155c31511d(["pooled_nodrop_glmm"]):::uptodate
x438aadf53305eaf8(["meta_reg_sub"]):::uptodate --> x1a5341c5a45972f9(["plt_metareg_sub"]):::outdated
xb8df53a3923736a6>"vizMetareg"]:::uptodate --> x1a5341c5a45972f9(["plt_metareg_sub"]):::outdated
x48b3c4ea88f3ca65(["meta_reg_trim_nodrop"]):::uptodate --> x739273a4187d8c44(["plt_metareg_trim_nodrop"]):::outdated
xb8df53a3923736a6>"vizMetareg"]:::uptodate --> x739273a4187d8c44(["plt_metareg_trim_nodrop"]):::outdated
x543688e28a1fc6f2>"fitSubgroup"]:::uptodate --> x61043ad3d4c8e37a(["subgroup_trim"]):::uptodate
xe37aeeab4f19d257{{"itergroup"}}:::uptodate --> x61043ad3d4c8e37a(["subgroup_trim"]):::uptodate
x16f58f5592cc23f2(["pooled_trim"]):::uptodate --> x61043ad3d4c8e37a(["subgroup_trim"]):::uptodate
x275ceffe01854d89>"reportMeta"]:::uptodate --> x8f6d13cb7c3e85ba(["meta_subgroup_glmm"]):::uptodate
x20d407903515e4c8(["subgroup_glmm"]):::uptodate --> x8f6d13cb7c3e85ba(["meta_subgroup_glmm"]):::uptodate
x42ecac41dddf0580(["tbl_merge"]):::uptodate --> x26e7b41b4fdef71e(["tbl_sub"]):::uptodate
xe507bce80d611fab>"mkReport"]:::uptodate --> x9c8a002797d6e8d0(["meta_eda_nodrop"]):::uptodate
xe9e91f34f1a53922(["pooled_groups_nodrop"]):::uptodate --> x9c8a002797d6e8d0(["meta_eda_nodrop"]):::uptodate
xf54d595d36ddf944(["meta_reg_sub_glmm"]):::uptodate --> xb28deb8abfe8e234(["plt_metareg_sub_glmm"]):::outdated
xb8df53a3923736a6>"vizMetareg"]:::uptodate --> xb28deb8abfe8e234(["plt_metareg_sub_glmm"]):::outdated
x275ceffe01854d89>"reportMeta"]:::uptodate --> x17068972d7fcb0cd(["meta_subgroup_sub_glmm"]):::uptodate
x0faa046694306504(["subgroup_sub_glmm"]):::uptodate --> x17068972d7fcb0cd(["meta_subgroup_sub_glmm"]):::uptodate
x67be920e14d52a62{{"raw"}}:::uptodate --> x948809345d27ea2b(["file_extract"]):::uptodate
xcfebc4d08e3ac7e1(["pooled_sub"]):::uptodate --> xf21d86b424b8c872(["bias_sub"]):::uptodate
x275ceffe01854d89>"reportMeta"]:::uptodate --> xf21d86b424b8c872(["bias_sub"]):::uptodate
x19d56b95df0a7e85>"poolES"]:::uptodate --> x16f58f5592cc23f2(["pooled_trim"]):::uptodate
x64501e899d71430b(["tbl_trim"]):::uptodate --> x16f58f5592cc23f2(["pooled_trim"]):::uptodate
xae2d712343e89314(["pooled_all_nodrop"]):::uptodate --> x2eba83c0e36aae3d(["bias_all_nodrop"]):::uptodate
x275ceffe01854d89>"reportMeta"]:::uptodate --> x2eba83c0e36aae3d(["bias_all_nodrop"]):::uptodate
x16f58f5592cc23f2(["pooled_trim"]):::uptodate --> x7d90d8c3f9be815f(["bias_trim"]):::uptodate
x275ceffe01854d89>"reportMeta"]:::uptodate --> x7d90d8c3f9be815f(["bias_trim"]):::uptodate
x16f58f5592cc23f2(["pooled_trim"]):::uptodate --> xf4b58dbf4ed40c45(["meta_trim"]):::uptodate
x275ceffe01854d89>"reportMeta"]:::uptodate --> xf4b58dbf4ed40c45(["meta_trim"]):::uptodate
x19d56b95df0a7e85>"poolES"]:::uptodate --> x0c55547544d10beb(["pooled_all"]):::uptodate
x07c0a25d8d1269ae(["tbl_clean"]):::uptodate --> x0c55547544d10beb(["pooled_all"]):::uptodate
x4e7a69155c31511d(["pooled_nodrop_glmm"]):::uptodate --> x2509500711bc82c3(["bias_nodrop_glmm"]):::uptodate
x275ceffe01854d89>"reportMeta"]:::uptodate --> x2509500711bc82c3(["bias_nodrop_glmm"]):::uptodate
x6c2a68b24919816c(["pooled_trim_glmm"]):::uptodate --> x979bec9dba5c139a(["meta_trim_glmm"]):::uptodate
x275ceffe01854d89>"reportMeta"]:::uptodate --> x979bec9dba5c139a(["meta_trim_glmm"]):::uptodate
x543688e28a1fc6f2>"fitSubgroup"]:::uptodate --> xa6d646770fa86dd5(["subgroup_nodrop"]):::uptodate
xe37aeeab4f19d257{{"itergroup"}}:::uptodate --> xa6d646770fa86dd5(["subgroup_nodrop"]):::uptodate
xae2d712343e89314(["pooled_all_nodrop"]):::uptodate --> xa6d646770fa86dd5(["subgroup_nodrop"]):::uptodate
x275ceffe01854d89>"reportMeta"]:::uptodate --> xa0de17b035f48f7a(["meta_subgroup_trim"]):::uptodate
x61043ad3d4c8e37a(["subgroup_trim"]):::uptodate --> xa0de17b035f48f7a(["meta_subgroup_trim"]):::uptodate
x19d56b95df0a7e85>"poolES"]:::uptodate --> xcfebc4d08e3ac7e1(["pooled_sub"]):::uptodate
x26e7b41b4fdef71e(["tbl_sub"]):::uptodate --> xcfebc4d08e3ac7e1(["pooled_sub"]):::uptodate
x19d56b95df0a7e85>"poolES"]:::uptodate --> xc573754fb982f8cc(["pooled_trim_nodrop"]):::uptodate
x64501e899d71430b(["tbl_trim"]):::uptodate --> xc573754fb982f8cc(["pooled_trim_nodrop"]):::uptodate
x07c0a25d8d1269ae(["tbl_clean"]):::uptodate --> x64501e899d71430b(["tbl_trim"]):::uptodate
xe507bce80d611fab>"mkReport"]:::uptodate --> x2e9a38145b3ac661(["meta_author"]):::uptodate
x631988a8d3d85fb3(["pooled_author"]):::uptodate --> x2e9a38145b3ac661(["meta_author"]):::uptodate
x948809345d27ea2b(["file_extract"]):::uptodate --> xe797a538520c914d(["tbl"]):::uptodate
xb4a3d4a2fc7bb7d2>"readData"]:::uptodate --> xe797a538520c914d(["tbl"]):::uptodate
xae2d712343e89314(["pooled_all_nodrop"]):::uptodate --> x7bf28e1f0f407874(["meta_all_nodrop"]):::uptodate
x275ceffe01854d89>"reportMeta"]:::uptodate --> x7bf28e1f0f407874(["meta_all_nodrop"]):::uptodate
x07c0a25d8d1269ae(["tbl_clean"]):::uptodate --> x2c3bd46c74689a75(["desc_clean"]):::uptodate
x48de5fd9e99c55ba>"tblSummary"]:::uptodate --> x2c3bd46c74689a75(["desc_clean"]):::uptodate
x3f7928f8d55f3ece(["meta_reg_trim_glmm"]):::uptodate --> x41990854a7bce4ec(["plt_metareg_trim_glmm"]):::outdated
xb8df53a3923736a6>"vizMetareg"]:::uptodate --> x41990854a7bce4ec(["plt_metareg_trim_glmm"]):::outdated
x0c55547544d10beb(["pooled_all"]):::uptodate --> x1da53b9024b2e84a(["bias_all"]):::uptodate
x275ceffe01854d89>"reportMeta"]:::uptodate --> x1da53b9024b2e84a(["bias_all"]):::uptodate
xcfebc4d08e3ac7e1(["pooled_sub"]):::uptodate --> x95b985a7fe0e3acc(["meta_sub"]):::uptodate
x275ceffe01854d89>"reportMeta"]:::uptodate --> x95b985a7fe0e3acc(["meta_sub"]):::uptodate
x6c2a68b24919816c(["pooled_trim_glmm"]):::uptodate --> x157d9cc65920f0ee(["bias_trim_glmm"]):::uptodate
x275ceffe01854d89>"reportMeta"]:::uptodate --> x157d9cc65920f0ee(["bias_trim_glmm"]):::uptodate
x4e7a69155c31511d(["pooled_nodrop_glmm"]):::uptodate --> xe1b50824ae96aefc(["meta_nodrop_glmm"]):::uptodate
x275ceffe01854d89>"reportMeta"]:::uptodate --> xe1b50824ae96aefc(["meta_nodrop_glmm"]):::uptodate
x275ceffe01854d89>"reportMeta"]:::uptodate --> xaf0034ed7fb04a01(["meta_subgroup"]):::uptodate
x97078af44030bc70(["subgroup_analysis"]):::uptodate --> xaf0034ed7fb04a01(["meta_subgroup"]):::uptodate
x0c55547544d10beb(["pooled_all"]):::uptodate --> x430992bea01a7746(["meta_all"]):::uptodate
x275ceffe01854d89>"reportMeta"]:::uptodate --> x430992bea01a7746(["meta_all"]):::uptodate
xe507bce80d611fab>"mkReport"]:::uptodate --> x9779f797366ec5b8(["meta_eda"]):::uptodate
x5622303d0fb3e0ca(["pooled_groups"]):::uptodate --> x9779f797366ec5b8(["meta_eda"]):::uptodate
x6cab7297675953ab>"fitRegression"]:::uptodate --> x48b3c4ea88f3ca65(["meta_reg_trim_nodrop"]):::uptodate
xc573754fb982f8cc(["pooled_trim_nodrop"]):::uptodate --> x48b3c4ea88f3ca65(["meta_reg_trim_nodrop"]):::uptodate
x6cab7297675953ab>"fitRegression"]:::uptodate --> x8fc76a8f0c4f8433(["meta_reg_nodrop"]):::uptodate
xae2d712343e89314(["pooled_all_nodrop"]):::uptodate --> x8fc76a8f0c4f8433(["meta_reg_nodrop"]):::uptodate
x19d56b95df0a7e85>"poolES"]:::uptodate --> x6c2a68b24919816c(["pooled_trim_glmm"]):::uptodate
x64501e899d71430b(["tbl_trim"]):::uptodate --> x6c2a68b24919816c(["pooled_trim_glmm"]):::uptodate
x6cab7297675953ab>"fitRegression"]:::uptodate --> x3b47b6779afe85cb(["meta_reg"]):::uptodate
x0c55547544d10beb(["pooled_all"]):::uptodate --> x3b47b6779afe85cb(["meta_reg"]):::uptodate
x2f8e058a4c200eca(["pooled_glmm"]):::uptodate --> x7435453e09723b05(["bias_glmm"]):::uptodate
x275ceffe01854d89>"reportMeta"]:::uptodate --> x7435453e09723b05(["bias_glmm"]):::uptodate
x19d56b95df0a7e85>"poolES"]:::uptodate --> xbd40d4173cdcd2f2(["pooled_sub_glmm"]):::uptodate
x26e7b41b4fdef71e(["tbl_sub"]):::uptodate --> xbd40d4173cdcd2f2(["pooled_sub_glmm"]):::uptodate
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xe507bce80d611fab>"mkReport"]:::uptodate --> x8258980e0682878d(["bias_author"]):::uptodate
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x6cab7297675953ab>"fitRegression"]:::uptodate --> x438aadf53305eaf8(["meta_reg_sub"]):::uptodate
xcfebc4d08e3ac7e1(["pooled_sub"]):::uptodate --> x438aadf53305eaf8(["meta_reg_sub"]):::uptodate
xdd4b0b70c7769dbd(["file_gbd"]):::uptodate --> x0d85e8aa1f7733e8(["tbl_gbd"]):::uptodate
x0c6b15df3123c413>"readGBD"]:::uptodate --> x0d85e8aa1f7733e8(["tbl_gbd"]):::uptodate
x07c0a25d8d1269ae(["tbl_clean"]):::uptodate --> x0d85e8aa1f7733e8(["tbl_gbd"]):::uptodate
xbd40d4173cdcd2f2(["pooled_sub_glmm"]):::uptodate --> x53a850c45ff9db8e(["meta_sub_glmm"]):::uptodate
x275ceffe01854d89>"reportMeta"]:::uptodate --> x53a850c45ff9db8e(["meta_sub_glmm"]):::uptodate
x7cddcc2458aa2f2a(["bias_eda"]):::uptodate --> xe0fba61fbc506510(["report"]):::uptodate
xb6e22c0b3cd30b1f(["bias_eda_nodrop"]):::uptodate --> xe0fba61fbc506510(["report"]):::uptodate
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x7bf28e1f0f407874(["meta_all_nodrop"]):::uptodate --> xe0fba61fbc506510(["report"]):::uptodate
x2e9a38145b3ac661(["meta_author"]):::uptodate --> xe0fba61fbc506510(["report"]):::uptodate
x9779f797366ec5b8(["meta_eda"]):::uptodate --> xe0fba61fbc506510(["report"]):::uptodate
x9c8a002797d6e8d0(["meta_eda_nodrop"]):::uptodate --> xe0fba61fbc506510(["report"]):::uptodate
x3b47b6779afe85cb(["meta_reg"]):::uptodate --> xe0fba61fbc506510(["report"]):::uptodate
x8fc76a8f0c4f8433(["meta_reg_nodrop"]):::uptodate --> xe0fba61fbc506510(["report"]):::uptodate
x543688e28a1fc6f2>"fitSubgroup"]:::uptodate --> xe122b0edd8e42abd(["subgroup_nodrop_glmm"]):::uptodate
xe37aeeab4f19d257{{"itergroup"}}:::uptodate --> xe122b0edd8e42abd(["subgroup_nodrop_glmm"]):::uptodate
x4e7a69155c31511d(["pooled_nodrop_glmm"]):::uptodate --> xe122b0edd8e42abd(["subgroup_nodrop_glmm"]):::uptodate
x275ceffe01854d89>"reportMeta"]:::uptodate --> x02cd47ce8e1b4444(["meta_subgroup_trim_glmm"]):::uptodate
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xbd40d4173cdcd2f2(["pooled_sub_glmm"]):::uptodate --> x092b777fcac5b9ae(["bias_sub_glmm"]):::uptodate
x275ceffe01854d89>"reportMeta"]:::uptodate --> x092b777fcac5b9ae(["bias_sub_glmm"]):::uptodate
x275ceffe01854d89>"reportMeta"]:::uptodate --> x819d16bc169fb30a(["meta_subgroup_nodrop_glmm"]):::uptodate
xe122b0edd8e42abd(["subgroup_nodrop_glmm"]):::uptodate --> x819d16bc169fb30a(["meta_subgroup_nodrop_glmm"]):::uptodate
x19d56b95df0a7e85>"poolES"]:::uptodate --> xae2d712343e89314(["pooled_all_nodrop"]):::uptodate
x07c0a25d8d1269ae(["tbl_clean"]):::uptodate --> xae2d712343e89314(["pooled_all_nodrop"]):::uptodate
xc573754fb982f8cc(["pooled_trim_nodrop"]):::uptodate --> xccb01fc1201c2f58(["bias_trim_nodrop"]):::uptodate
x275ceffe01854d89>"reportMeta"]:::uptodate --> xccb01fc1201c2f58(["bias_trim_nodrop"]):::uptodate
xee61ab83b7d675c1>"iterate"]:::uptodate --> x5622303d0fb3e0ca(["pooled_groups"]):::uptodate
xe37aeeab4f19d257{{"itergroup"}}:::uptodate --> x5622303d0fb3e0ca(["pooled_groups"]):::uptodate
x07c0a25d8d1269ae(["tbl_clean"]):::uptodate --> x5622303d0fb3e0ca(["pooled_groups"]):::uptodate
x67be920e14d52a62{{"raw"}}:::uptodate --> xdd4b0b70c7769dbd(["file_gbd"]):::uptodate
xe507bce80d611fab>"mkReport"]:::uptodate --> xb6e22c0b3cd30b1f(["bias_eda_nodrop"]):::uptodate
xe9e91f34f1a53922(["pooled_groups_nodrop"]):::uptodate --> xb6e22c0b3cd30b1f(["bias_eda_nodrop"]):::uptodate
x6e52cb0f1668cc22(["readme"]):::started --> x6e52cb0f1668cc22(["readme"]):::started
end
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