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A nextflow pipeline to perform in silico dilution between two fastq samples.

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neil-n-zhang/nf_insilico_dilution

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nf_insilico_dilution

A nextflow pipeline to perform in silico dilution between two fastq samples.

Example:

nextflow run insilico_dilution.nf --fqA_R1 Sample1_1.fastq --fqA_R2 Sample1_2.fastq --fqB_R1 Sample2_50bp_R1.fastq --fqB_R2 Sample2_50bp_R2.fastq --totalbases 10000 --fqA_fraction 0.15

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A nextflow pipeline to perform in silico dilution between two fastq samples.

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