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title authors authorLinks affiliations translators translatorLinks date dataset abstract
Analyse génomique de la propagation de COVID-19. Rapport de situation du 27-03-2020.
Sidney M. Bell
Nicola Müller
Emma Hodcroft
Cassia Wagner
James Hadfield
Misja Ilcisin
Richard Neher
Trevor Bedford
Fred Hutch, Seattle, USA; Biozentrum, Basel, Switzerland; CZI, CA, USA
Meriem El Karoui
Maxime Morin
Etienne Simon-Loriere
27 Mars 2020
Ce rapport utilise des données génomiques partagées publiquement pour suivre la propagation de COVID-19. Ces rapports sont mis à jour chaque semaine.

Table des matières

# Résumé exécutif

Ici, nous avons analysé 1495 génomes du COVID-19 partagés publiquement. En comparant ces génomes viraux entre eux, nous pouvons caractériser comment COVID-19 évolue et se déplace dans le monde:

**Europe**  
* Nous continuons à observer un fort mélange d'échantillons à travers l'Europe, ce qui laisse penser que le virus a continué à traverser les frontières au cours des 3 à 5 dernières semaines. Lorsque les mesures d'atténuation auront eu le temps de faire sentir leurs effets, il se peut que nous constations un plus grand nombre de cas groupés par pays.

**Amérique du Nord**   
* Aux États-Unis, les modes de transmission sont complexes : les échantillons prélevés dans des régions opposées du pays présentent encore des liens étroits.
* L'État de Washington a connu au moins deux introductions indépendantes (la première provenant probablement de Chine, la seconde d'Europe), qui ont conduit à deux chaînes de transmission distinctes.
* Il existe des preuves d'une transmission locale probable dans plusieurs États, l'exemple le plus clair étant celui de la Californie.

**Amérique centrale et du Sud**
* Nous avons reçu de nouvelles séquences d'Amérique du Sud cette semaine, mais l'échantillonnage reste limité. Il est possible qu'il y ait plus d'activité COVID dans cette région que ce qui est observé dans les données disponibles, mais nous ne pouvons pas le dire avec certitude.

**Asie**  
* Nous trouvons des preuves de l'exportation récente de COVID-19 d'Iran.

**Afrique**  
* La phylogénie suggère une transmission locale probable à Kinshasa, en République démocratique du Congo, depuis plus de 11 jours.
* Nous avons reçu de nouvelles séquences en provenance d'Afrique cette semaine, mais l'échantillonnage reste limité ; il pourrait y avoir beaucoup plus d'activité COVID dans cette région que ce qui est observé dans les données disponibles.

**Océanie**
* Les données génétiques indiquent une transmission locale en Nouvelle-Galles du Sud, en Australie.

Ressources sur COVID-19

Nous avons préparé quelques ressources qui valent la peine d’être lues pour vous familiariser avec COVID-19 et le virus qui le provoque, SARS-CoV-2 aussi connu sous le nom de hCov-19.

Ces informations faciliteront l’interprétation des données que nous présentons dans ce document.

Si vous n’êtes pas familier avec les arbres phylogénétiques, nous vous encourageons à consulter "Comment lire les phylogénies" et à revenir quand vous serez prêt.


## Ressources Nextstrain

[Comment lire les phylogénies](https://nextstrain.org/narratives/trees-background/fr).  

[Informations sur les coronavirus](https://nextstrain.org/help/coronavirus/human-CoV).

[Contexte de l'émergence de hCoV-19](https://nextstrain.org/help/coronavirus/SARS-CoV-2).

[FAQs](https://nextstrain.org/help/coronavirus/FAQ).

[Idées Reçues](https://nextstrain.org/narratives/ncov/sit-rep/fr/2020-03-13?n=11).

## Ressources externes  
[Rapports de situation de l'OMS](https://www.who.int/emergencies/diseases/novel-coronavirus-2019/situation-reports).

[Ressources du CDC](https://www.cdc.gov/coronavirus/2019-ncov/index.html).

[Couverture COVID-19 de NYTimes](https://www.nytimes.com/news-event/coronavirus).

[Monde en Chiffres](https://ourworldindata.org/coronavirus).

[Posez vos questions à un scientifique et FAQ](https://covid19.fas.org/l/en).

Une remarque sur l'échantillonnage

WNous disposons actuellement de séquences provenant d'isolats viraux prélevés dans 48 pays sur 6 continents. C'est une réalisation incroyable : le séquençage d'un virus à ARN inconnu et de grande taille en pleine pandémie est difficile, et n'est possible que grâce au travail exceptionnel et au partage en temps réel des données par les scientifiques et les médecins du monde entier.

Si ces données nous permettent de déduire de nombreuses caractéristiques utiles de l'épidémie et de suivre sa propagation en temps réel, il est important de souligner que nos conclusions sont limitées par les données disponibles.

Par exemple, la carte ne montre que très peu de séquences provenant des pays du Sud. Ce n'est PAS parce que COVID-19 ne circule pas dans ces régions, ou que ces cas ne sont pas aussi cruciaux à comprendre ; c'est plutôt que nous n'avons pas beaucoup de données disponibles sur ces régions. La taille de chaque cercle sur la carte indique la quantité de données actuellement disponibles dans cette zone, plutôt que l'ampleur réelle de l'épidémie.

Les mises à jour pour l'Europe

La propagation transfrontalière s'est poursuivie au cours des 3 à 5 dernières semaines

Ici, nous montrons des échantillons collectés dans toute l'Europe au cours des trois dernières semaines, colorés par le pays dans lequel ils ont été isolés. Il faut noter que si certains petits regroupements de cas sont spécifiques à un pays, il y a aussi beaucoup de mélanges entre les isolats de différents pays.

Cela suggère qu'il y a eu une propagation transfrontalière continue au cours des 3 à 5 dernières semaines.

En revanche le regroupement géographique pourrait se renforcer avec les récents efforts d'atténuation qui limitent les déplacements entre les régions.

Nouvelles séquences de l'Islande

Nous avons reçu de nombreuses nouvelles séquences en provenance d'Islande. En colorant par l'historique d'exposition de chaque cas (lorsqu'il est connu), nous constatons que beaucoup de ces cas proviennent de voyageurs récents. Nous travaillons encore pour analyser toutes ces nouvelles données, et nous ferons part de nos conclusions la semaine prochaine.

Mises à jour pour l'Amérique du Nord

La transmission à travers les États-Unis est complexe et mal comprise

Même à l'intérieur des États-Unis, les modes de transmission sont très complexes.

Par exemple, des échantillons récents du Connecticut (extrémités sélectionnées) sont à la fois ancestraux et mélangés avec des échantillons de l'État de Washington (extrémités plus claires). Bien que davantage de données soient nécessaires pour tirer des conclusions définitives, cela suggère qu'il y a eu une transmission récente entre différentes régions du pays, même très éloignées.

Cela montre que les modèles de transmission à travers les États-Unis sont beaucoup plus complexes que ce qui est représenté dans les données actuellement disponibles. Des données supplémentaires nous aideront à comprendre ce qui est probablement une épidémie nationale profondément interconnectée qui se déroule sur fond de réponses très hétérogènes de la part de chaque État.

Plusieurs chaînes de transmission circulant dans l'État de Washington

En examinant les cas dans l'État de Washington, nous constatons qu'il existe au moins deux groupes de foyers locaux distincts.

Toutefois, les deux groupes ont des origines différentes : le premier groupe est plus étroitement lié aux échantillons provenant de Chine, tandis que le second est plus étroitement lié aux échantillons provenant d'Europe. Il est également possible que ces introductions aient été indirectes, avec des cas non échantillonnés provenant d'une autre région entre temps.

Probablement deux chaînes de transmission locales en Californie

Nous observons des tendances similaires ailleurs aux États-Unis.

Ici, nous voyons plusieurs échantillons du comté de Solano, dans le nord de la Californie, qui sont échantillonnés à des dates différentes, mais dont les séquences sont très proches les unes des autres.

Bien que les données disponibles en Californie soient trop limitées pour tirer des conclusions solides, cette indication préliminaire est cohérente avec de la transmission locale dans le comté de Solano.

Ailleurs dans l'arbre, on observe un schéma similaire pour les échantillons isolés dans le comté de Santa Clara.

Il est probable que les regroupements de cas de ces comtés soient dus à des introductions séparées, du fait de leur position relative dans l'arbre.

Mises à jour pour l'Amérique centrale et du Sud

Les cas échantillonnés en Amérique du Sud sont principalement liés à des voyages

Nous n'avons pas encore beaucoup de données sur les séquences génétiques d'Amérique du Sud. Parmi les données disponibles, la plupart proviennent de voyageurs. Ici, chaque cas est coloré par l'historique d'exposition connu.

Bien que des tendances potentiellement intéressantes commencent à émerger dans les cas non liés au voyage, nous ne disposons pas encore de suffisamment de renseignements pour en tirer des conclusions. Les efforts de séquençage s'intensifient et nous ferons un rapport lorsque la situation deviendra plus claire.

Mises à jour pour l'Asie

Export of COVID-19 from Iran

Nous ne disposons pas encore de génomes viraux provenant d'Iran. Cependant, nous disposons de séquences provenant de nombreux cas ayant fait l'objet d'un voyage en Iran.

La plupart des séquences ayant un historique de voyage en Iran se regroupent, ce qui suggère qu'un grand nombre de cas iraniens proviennent d'une seule introduction en Iran.

Tout en bas de l'arbre, nous voyons une nouvelle séquence d'une patiente du Pakistan qui aurait voyagé en Iran. Il est intéressant de noter que ce cas est un cas isolé par rapport aux autres cas que nous connaissons en Iran, mais qui a été échantillonné à peu près au même moment.

Cela correspond à plusieurs hypothèses possibles ; à mesure que d'autres données apparaîtront, nous mettrons à jour notre analyse.

Mises à jour pour l'Afrique

Des preuves de transmission locale à Kinshasa, au Congo

De nouvelles séquences de Kinshasa en République Démocratique du Congo montrent des preuves de plusieurs événements d'introduction distincts.

Certaines de ces séquences forment un groupe de cas locaux très proches les uns des autres, qui ont été échantillonnés à plusieurs jours de distance.

Cela correspond à une transmission locale, en cours depuis au moins le 15 mars (la date de prélèvement du cas le plus ancien qui semble faire partie de cette chaîne de transmission locale) et peut-être avant.

L'excellent travail de l'INRB (Institut National pour la Recherche Biomedicale) qui a permis de séquencer le virus à partir d' échantillons plus anciens permet de voir la transmission communautaire qui est cachée dans de nombreux autres endroits.

Mises à jour pour l'Océanie

Transmission locale en Nouvelle-Galles du Sud

De nouvelles séquences en provenance d'Australie montrent des preuves de transmission locale à travers la Nouvelle-Galles du Sud. Le virus circule probablement dans cette région depuis au moins la fin du mois de février.

Mesures que vous pouvez prendre

En tant que particulier

  • Réduisez drastiquement le nombre de personnes avec lesquelles vous êtes en contact chaque jour, surtout si vous faites partie d'un groupe vulnérable (par exemple, les personnes âgées et les personnes souffrant de maladies préexistantes).
  • N'oubliez pas que même si vous ne faites pas partie de ces personnes vulnérables, de nombreuses personnes autour de vous le sont ; suivez ces pratiques pour protéger les autres.
  • Lavez-vous les mains "comme si vous veniez de couper un piment et que vous deviez changer une lentille de contact".
  • Restez à la maison si vous êtes malade ; soyez prêt à vous procurer quelques provisions supplémentaires au cas où vous auriez besoin de vous mettre en quarantaine.
  • Si vous êtes un employeur, encouragez vos employés à rester chez eux lorsqu'ils sont malades (et soutenez-les financièrement).

En tant qu'autorité responsable

  • Rendre les tests gratuits et largement disponibles.
  • Mettre en place des mesures de distanciation sociale.
  • Financer et mettre en œuvre de vastes efforts de "contact tracing" (traçage des contacts).
  • Soutenir financièrement les personnes touchées par les mesures de distanciation sociale (par exemple, les travailleurs payés a l'heure, les personnes ayant des responsabilités, d'aide aux personnes âgées ou aux enfants, les petites entreprises, etc.).
## En résumé
####  Dans les prochaines semaines, nous surveillerons l'épidémie européenne pour voir si les nouvelles mesures d'atténuation ont permis d'endiguer la transmission transfrontalière.
<br><br>
#### Nous surveillerons la situation en Amérique du Sud pour détecter des signes de transmission locale à mesure que de nouvelles séquences seront disponibles.
<br><br>
####  L'épidémie américaine présente probablement des schémas de transmission très complexes, tant au niveau de l'importation que de la propagation, et à travers des régions du pays très disparates. On trouve des preuves de l'existence de multiples chaînes de transmission locales dans l'État de Washington et en Californie.
<br><br>
#### Nous avons trouvé des preuves de transmission locale en Nouvelle-Galles du Sud, en Australie.
<br><br>
#### Nous trouvons des preuves de transmission locale à Kinshasa en RDC. Nous n'avons pas encore suffisamment de données pour évaluer si le virus circule localement dans d'autres régions d'Afrique.

Crédit scientifique

Nous tenons à souligner le superbe travail accompli si rapidement par tous les scientifiques impliqués dans cette épidémie, et en particulier ceux qui travaillent en Chine. Ce n'est que par le partage rapide des données génomiques et des métadonnées que de telles analyses sont possibles.


Nous remercions également GISAID d'avoir fourni la plate-forme à travers laquelle ces données peuvent être téléchargées et partagées.


We are grateful for the data gathered by these originating labs:

* Andersen Lab, The Scripps Research Institute
* Arizona Department of Health Services
* Auckland Hospital
* BCCDC Public Health Laboratory
* Bamrasnaradura Hospital
* Beijing Institute of Microbiology and Epidemiology
* Bundeswehr Institute of Microbiology
* CH Jean de Navarre Laboratoire de Biologie
* CHRU Pontchaillou - Laboratoire de Virologie
* CHU Gabriel Montpied
* CNR Virus des Infections Respiratoires - France SUD
* COMPLEJO ASISTENCIAL UNIVERSITARIO DE BURGOS
* CR&WISCO GENERAL HOSPITAL
* California Department of Health
* California Department of Public Health
* Center of Medical Microbiology, Virology, and Hospital Hygiene, University of Duesseldorf
* Centers for Disease Control, R.O.C. (Taiwan)
* Centre Hositalier Universitaire de Rouen Laboratoire de Virologie
* Centre Hospitalier Compiegne Laboratoire de Biologie
* Centre Hospitalier Regional Universitaire de Nantes Laboratoire de Virologie
* Centre Hospitalier Rene Dubois Laboratoire de Microbiologie - Bat A
* Centre Hospitalier de Bourg en Bresse
* Centre Hospitalier de Macon
* Centre Hospitalier de Valence
* Centre for Human and Zoonotic Virology (CHAZVY), College of Medicine University of Lagos/Lagos University Teaching Hospital (LUTH), part of the Laboratory Network of the Nigeria Centre for Disease Control (NCDC)
* Centre for Infectious Diseases and Microbiology - Public Health
* Centre for Infectious Diseases and Microbiology Laboratory Services
* Centre for Infectious Diseases and Microbiology Public Health
* Centre for Infectious Diseases and Microbiology- Public Health
* Centro Hospital do Porto, E.P.E. - H. Geral de Santo Antonio
* Centro Hospitalar e Universitario de Sao Joao, Porto
* Charite Universitatsmedizin Berlin, Institute of Virology; Institut fur Mikrobiologie der Bundeswehr, Munich
* Chiu Laboratory, University of California, San Francisco
* Clinica Alemana de Santiago, Chile
* Clinica Santa Maria, Santiago, Chile
* Clinical Microbiology Lab
* Connecticut State Department of Public Health
* Dasman Diabetes Institute
* Dasman Diabetes Institute and Virology Laboratory Ministry of Health
* Department of Clinical Microbiology
* Department of Clinical Pathology, Pamela Youde Nethersole Eastern Hospital
* Department of Infectious Diseases, Istituto Superiore di Sanita, Roma , Italy
* Department of Infectious Diseases, Istituto Superiore di Sanita, Rome, Italy
* Department of Infectious and Tropical Diseases, Bichat Claude Bernard Hospital, Paris
* Department of Internal Medicine, Triemli Hospital
* Department of Laboratory Medicine, National Taiwan University Hospital
* Department of Microbiology, Faculty of Medicine, The Chinese University of Hong Kong, Hong Kong SAR, China
* Department of Microbiology, Institute for Viral Diseases, College of Medicine, Korea University
* Department of Pathology, Princess Margaret Hospital
* Department of Pathology, Toshima Hospital
* Department of Pathology, United Christian Hospital
* Department of Virology III, National Institute of Infectious Diseases
* Department of Virology and Immunology, University of Helsinki and Helsinki University Hospital, Huslab Finland
* Department of Virus and Microbiological Special diagnostics, Statens Serum Institut, Copenhagen, Denmark.
* Department of microbiology laboratory,Anhui Provincial Center for Disease Control and Prevention
* Dept. of Pathology, National Institute of Infectious Diseases
* Dept. of Virology III, National Institute of Infectious Diseases
* Dienst Gezondheid & Jeugd Zuid-Holland Zuid
* Division of Infectious Diseases, Department of Internal Medicine, Korea University College of Medicine
* Division of Infectious Diseases, University Hospital Zurich
* Division of Viral Diseases, Center for Laboratory Control of Infectious Diseases, Korea Centers for Diseases Control and Prevention
* Dunedin Hospital
* Dutch COVID-19 response team
* ErasmusMC
* FUNDACION JIMENEZ DIAZ
* Foundation Elisabeth-Tweesteden Ziekenhuis
* Foundation Pamm
* Fujian Center for Disease Control and Prevention
* General Hospital of Central Theater Command of People's Liberation Army of China
* Gorgas Memorial Institute for Health Studies
* Guangdong Provincial Center for Diseases Control and Prevention; Guangdong Provincial Public Health
* Guangdong Provincial Center for Diseases Control and Prevention; Guangdong Provinical Public Health
* Guangdong Provincial Center for Diseases Control and Prevention;Guangdong Provincial Institute of Public Health
* Guangdong Provincial Institution of Public Health, Guangdong Provinical Center for Disease Control and Prevention
* HOSPITAL SANTA MARIA NAI
* HUS Diagnostiikkakeskus, Hallinto
* Hangzhou Center for Disease Control and Prevention
* Hangzhou Center for Disease and Control Microbiology Lab
* Harborview Medical Center
* Hong Kong Department of Health
* Hopital Instruction des Armees - BEGIN
* Hopital Robert Debre Laboratoire de Virologie
* Hopital franco britannique - Service des Urgences
* Hopitaux universitaires de Geneve Laboratoire de Virologie
* Hospital Israelita Albert Einstein
* Hospital Sao Joaquim Beneficencia Portuguesa
* Hospital de Talca, Chile
* IL Department of Public Health Chicago Laboratory
* INMI Lazzaro Spallanzani IRCCS
* Indian Council of Medical Research - National Institute of Virology
* Indian Council of Medical Research-National Institute of Virology
* Institut Medico legal- Hop R. Poincare
* Institut des Agents Infectieux (IAI) Hospices Civils de Lyon
* Institut des Agents Infectieux (IAI), Hospices Civils de Lyon
* Institute of Pathogen Biology, Chinese Academy of Medical Sciences & Peking Union Medical College
* Institute of Viral Disease Control and Prevention, China CDC
* Instituto Nacional de Enfermedades Respiratorias
* Japanese Quarantine Stations
* Jiangxi province Center for Disease Control and Prevention
* Jingzhou Center for Disease Control and Prevention
* KU Leuven, Clincal and Epidemiological Virology
* KU Leuven, Clinical and Epidemiological Virology
* Klinik Hirslanden Zurich
* Korea Centers for Disease Control & Prevention (KCDC) Center for Laboratory Control of Infectious Diseases Division of Viral Diseases
* LABM GH nord Essonne
* LACEN RJ - Laboratorio Central de Saude Publica Noel Nutels
* LACEN/ES - Laboratorio Central de Saude Publica do Espirito Santo
* Laboiratorio Fleury
* Laboratoire National de Sante
* Laboratoire de Virologie Institut de Virologie - INSERM U 1109 Hopitaux Universitaires de Strasbourg
* Laboratoire de Virologie, HUG
* Laboratorio Central de Saude Publica Professor Goncalo Moniz  LACEN/BA
* Laboratorio de Ecologia de Doencas Transmissiveis na Amazonia, Instituto Leonidas e Maria Deane - Fiocruz Amazonia
* Laboratorio de Referencia Nacional de Virus Respiratorio. Instituto Nacional de Salud. Peru
* Laboratorio de Referencia Nacional de Virus Respiratorios. Instituto Nacional de Salud Peru
* Laboratorio di Microbiologia e Virologia, Universita Vita-Salute San Raffaele, Milano
* Laboratory Medicine
* Laboratory of Molecular Virology International Center for Genetic Engineering and Biotechnology (ICGEB)
* Laboratory of Molecular Virology International Center fro Genetic Engineering and Biotechnology (ICGEB)
* Laboratory of Molecular Virology, Pontificia Universidad Catolica de Chile
* Lapland Central Hospital
* MHC Brabant Zuidoost
* MHC Drente
* MHC Flevoland
* MHC Gooi & Vechtstreek
* MHC Haaglanden
* MHC Hart voor Brabant
* MHC Kennemerland
* MHC Rotterdam-Rijnmond
* MHC Utrecht
* MHC West-Brabant
* MSHS Clinical Microbiology Laboratories
* Massachusetts Department of Public Health
* Minnesota Department of Health, Public Health Laboratory
* Monash Medical Centre
* NHC Key laboratory of Enteric Pathogenic Microbiology, Institute of Pathogenic Microbiology
* NRL for Influenza, Centrum Epidemiology and Microbiology of National Institute of Public Health, Czech Republic
* NYU Langone Health
* National Centre for Infectious Diseases
* National Influenza Center - Instituto Adolfo Lutz
* National Influenza Center - National Institute of Hygiene and Epidemiology (NIHE)
* National Influenza Center, National Institute of Hygiene and Epidemiology (NIHE)
* National Influenza Centre, National Public Health Laboratory, Kathmandu, Nepal
* National Institute for Communicable Diseases of the National Health Laboratory Service
* National Institute for Viral Disease Control and Prevention, China CDC
* National Public Health Laboratory
* National Public Health Laboratory, National Centre for Infectious Diseases
* National Public Health Surveillance Laboratory, Vilnius, Lithuania
* Pathology Queensland
* Prince of Wales Hospital
* Providence Regional Medical Center
* Public Health Laboratory
* Public Health Laboratory, Saudi CDC
* Public Health Ontario Laboratory
* R. G. Lugar Center for Public Health Research,  National Center for Disease Control and Public Health (NCDC) of Georgia.
* RIVM
* Regional Virus Laboratory, Belfast
* Respiratory Virus Unit, Microbiology Services Colindale, Public Health England
* Rockhampton Base Hospital
* Saitama Medical University
* Saitama Medical University Hospital
* Santa Clara County Public Health Department
* Seattle Flu Study
* Second Hospital of Anhui Medical University
* Serology, Virology and OTDS Laboratories (SAViD), NSW Health Pathology Randwick
* Servicio Microbiologia, Hospital Clinico Universitario, Valencia
* Servicio Microbiologia. Hospital Clinico Universitario. Valencia.
* Servicio de Microbiologia. Consorcio Hospital General Universitario de Valencia
* Shandong Provincial Center for Disease Control and Prevention
* Shanghai Public Health Clinical Center, Shanghai Medical College, Fudan University
* Shenzhen Key Laboratory of Pathogen and Immunity, National Clinical Research Center for Infectious Disease, Shenzhen Third People's Hospital
* Shenzhen Third People's Hospital
* Singapore General Hospital
* Singapore General Hospital, Molecular Laboratory, Division of Pathology
* Sorbonne Universite, Inserm et Assistance Publique-Hopitaux de Paris (Pitie Salpetriere)
* South China Agricultural University
* State Health Office Baden-Wuerttemberg
* State Key Laboratory for Diagnosis and Treatment of Infectious Diseases, National Clinical Research Center for Infectious Diseases, First Affiliated Hospital, Zhejiang University School of Medicine, Hangzhou, China 310003
* State Key Laboratory for Diagnosis and Treatment of Infectious Diseases, National Clinical Research Center for Infectious Diseases, First Affiliated Hospital, Zhejiang University School of Medicine, Hangzhou, China. 310003
* State Key Laboratory of Respiratory Disease, National Clinical Research Center for Respiratory Disease, Guangzhou Institute of Respiratory Health, the First Affiliated Hospital of Guangzhou Medical University
* Sullivan Nicolaides Pathology
* Tai Lung Veterinary Laboratory, Agriculture, Fisheries and Conservation Department
* Taiwan Centers for Disease Control
* Texas Department of State Health Services
* The Central Hospital Of Wuhan
* The National Institute of Public Health Center for Epidemiology and Microbiology
* The University of Hong Kong - Shenzhen Hospital
* Tianmen Center for Disease Control and Prevention
* UCD National Virus Reference Laboratory
* UW Virology Lab
* Union Hospital of Tongji Medical College, Huazhong University of Science and Technology
* University of Wisconsin-Madison AIDS Vaccine Research Laboratories
* University of Wisconsin-Madison AIDS Vaccine Research Laboratory
* Unknown
* Utah Public Health Laboratory
* Valley Medical Center
* Victorian Infectious Diseases Reference Laboratory (VIDRL)
* Viral Respiratory Lab, National Institute for Biomedical Research (INRB)
* ViroGenetics - BSL3 Laboratory of Virology; Human Genome Variation Research Group & Genomics Centre MCB; Bioinformatics Research Group  Department of Virology
* Virological Research Group, Szentagothai Research Centre
* Virological Research Group, Szentagothai Research Centre, University of Pecs
* Virology Department, Royal Infirmary of Edinburgh, NHS Lothian
* Virology Department, Sheffield Teaching Hospitals NHS Foundation Trust
* Virology Unit, Institut Pasteur du Cambodge.
* Virology laboratory Ministry of Health Kuwait sequenced at Dasman Diabetes Institute
* WA State Department of Health
* WHO National Influenza Centre Russian Federation
* Wales Specialist Virology Centre
* Washington State Department of Health
* Washington State Public Health Lab
* Weifang Center for Disease Control and Prevention
* Wellington Hospital
* West of Scotland Specialist Virology Centre, NHSGGC
* Wisconsin Department of Health Services
* Wuhan Fourth Hospital
* Wuhan Institute of Virology, Chinese Academy of Sciences
* Wuhan Jinyintan Hospital
* Wuhan Lung Hospital
* Yale Clinical Virology Laboratory
* Yongchuan District Center for Disease Control and Prevention
* Zhejiang Provincial Center for Disease Control and Prevention
* Zhongxian Center for Disease Control and Prevention

Crédit scientifique détaillé

Ces données ont été partagées par GISAID. Nous remercions chaleureusement leurs contributions.


Sur la droite nous indiquons les séquences partagées par chaque laboratoire.


The SARS-CoV-2 genomes were generously shared by scientists at these submitting labs:

* Andersen Lab, The Scripps Research Institute
	* USA/CA-MG0987/2020
	* USA/CA-PC101P/2020

* Arizona Department of Health Services
	* USA/AZ1/2020

* Auckland Hospital
	* NewZealand/01/2020
	* NewZealand/20VR0189/2020
	* NewZealand/20VR019/2020
	* NewZealand/20VR0206/2020

* BCCDC Public Health Laboratory
	* Canada/BC_02421/2020
	* Canada/BC_13297/2020
	* Canada/BC_17397/2020
	* Canada/BC_25211/2020
	* Canada/BC_35720/2020
	* Canada/BC_37_0-2/2020
	* Canada/BC_40860/2020
	* Canada/BC_41851/2020
	* Canada/BC_64686/2020
	* Canada/BC_65034/2020
	* Canada/BC_66353/2020
	* Canada/BC_69243/2020
	* Canada/BC_78548/2020
	* Canada/BC_83109/2020
	* Canada/BC_83163/2020

* Bamrasnaradura Hospital
	* Nonthaburi/61/2020
	* Nonthaburi/74/2020

* Beijing Institute of Microbiology and Epidemiology
	* pangolin/Guangdong/P2S/2019
	* pangolin/Guangxi/P1E/2017
	* pangolin/Guangxi/P2V/2017
	* pangolin/Guangxi/P3B/2017
	* pangolin/Guangxi/P4L/2017
	* pangolin/Guangxi/P5E/2017
	* pangolin/Guangxi/P5L/2017

* Bundeswehr Institute of Microbiology
	* Germany/BavPat2/2020
	* Germany/BavPat3/2020

* CH Jean de Navarre Laboratoire de Biologie
	* France/HF2196/2020

* CHRU Pontchaillou - Laboratoire de Virologie
	* France/B2330/2020
	* France/B2334/2020
	* France/B2335/2020
	* France/B2336/2020
	* France/B2337/2020
	* France/B2340/2020
	* France/B2343/2020
	* France/B2344/2020
	* France/B2346/2020
	* France/B2348/2020
	* France/B2349/2020
	* France/B2351/2020

* CHU Gabriel Montpied
	* France/Clermont-Ferrand_650/2020
	* France/Clermont-Ferrand_651/2020

* CNR Virus des Infections Respiratoires - France SUD
	* France/Pollionay_1733/2020
	* France/RA739/2020
	* France/Valence_425/2020

* COMPLEJO ASISTENCIAL UNIVERSITARIO DE BURGOS
	* Spain/CastillayLeon201437/2020

* CR&WISCO GENERAL HOSPITAL
	* Wuhan/HBCDC-HB-05/2020

* California Department of Health
	* USA/CA3/2020
	* USA/CA4/2020
	* USA/CA5/2020

* California Department of Public Health
	* USA/CA-CDPH-UC1/2020
	* USA/CA-CDPH-UC18/2020
	* USA/CA-CDPH-UC19/2020
	* USA/CA-CDPH-UC2/2020
	* USA/CA-CDPH-UC20/2020
	* USA/CA-CDPH-UC21/2020
	* USA/CA-CDPH-UC22/2020
	* USA/CA-CDPH-UC23/2020
	* USA/CA-CDPH-UC24/2020
	* USA/CA-CDPH-UC25/2020
	* USA/CA-CDPH-UC3/2020
	* USA/CA-CDPH-UC4/2020
	* USA/CA-CDPH-UC5/2020
	* USA/CA-CDPH-UC6/2020
	* USA/CA-CDPH-UC7/2020
	* USA/CA-CDPH-UC8/2020
	* USA/CA-CDPH-UC9/2020
	* USA/CA1/2020
	* USA/CA2/2020
	* USA/CA6/2020
	* USA/CA7/2020
	* USA/CA8/2020
	* USA/CA9/2020
	* USA/UC-CDPH-UC11/2020

* Center of Medical Microbiology, Virology, and Hospital Hygiene, University of Duesseldorf
	* Germany/NRW-01/2020
	* Germany/NRW-011/2020
	* Germany/NRW-02-1/2020
	* Germany/NRW-03/2020
	* Germany/NRW-04/2020
	* Germany/NRW-05/2020
	* Germany/NRW-06/2020
	* Germany/NRW-07/2020
	* Germany/NRW-08/2020
	* Germany/NRW-09/2020
	* Germany/NRW-10/2020

* Centers for Disease Control, R.O.C. (Taiwan)
	* Taiwan/2/2020

* Centre Hositalier Universitaire de Rouen Laboratoire de Virologie
	* France/N1620/2020
	* France/N2223/2020

* Centre Hospitalier Compiegne Laboratoire de Biologie
	* France/HF1795/2020
	* France/HF1805/2020
	* France/HF1870/2020
	* France/HF1871/2020
	* France/HF1986/2020
	* France/HF1988/2020
	* France/HF1989/2020
	* France/HF1993/2020
	* France/HF1995/2020
	* France/HF2151/2020
	* France/HF2174/2020
	* France/HF2234/2020
	* France/HF2237/2020
	* France/HF2239/2020

* Centre Hospitalier Regional Universitaire de Nantes Laboratoire de Virologie
	* France/PL1643/2020

* Centre Hospitalier Rene Dubois Laboratoire de Microbiologie - Bat A
	* France/IDF1980/2020

* Centre Hospitalier de Bourg en Bresse
	* France/Bourg-en-Bresse_06678/2020
	* France/Bourg-en-Bresse_06813/2020

* Centre Hospitalier de Macon
	* France/Macon_06756/2020

* Centre Hospitalier de Valence
	* France/Valence_532/2020

* Centre for Human and Zoonotic Virology (CHAZVY), College of Medicine University of Lagos/Lagos University Teaching Hospital (LUTH), part of the Laboratory Network of the Nigeria Centre for Disease Control (NCDC)
	* Nigeria/Lagos01/2020

* Centre for Infectious Diseases and Microbiology - Public Health
	* Australia/NSW10/2020
	* Australia/NSW12/2020
	* Australia/NSW13/2020
	* Australia/NSW14/2020

* Centre for Infectious Diseases and Microbiology Laboratory Services
	* Australia/NSW01/2020
	* Australia/NSW02/2020
	* Australia/NSW04/2020
	* Australia/NSW05/2020
	* Australia/NSW06/2020
	* Australia/NSW07/2020
	* Australia/NSW08/2020
	* Australia/NSW09/2020

* Centre for Infectious Diseases and Microbiology Public Health
	* Australia/NSW15/2020
	* Australia/NSW18/2020
	* Australia/NSW19/2020
	* Australia/NSW21/2020
	* Australia/NSW24/2020
	* Australia/NSW25/2020
	* Australia/NSW26/2020
	* Australia/NSW27/2020
	* Australia/NSW28/2020
	* Australia/NSW31/2020
	* Australia/NSW35/2020
	* Australia/NSW36/2020
	* Australia/NSW37/2020
	* Australia/NSW38/2020
	* Australia/NSW39/2020
	* Australia/NSW40/2020
	* Australia/NSW41/2020
	* Australia/NSW44/2020
	* Australia/NSW45/2020
	* Australia/NSW47/2020
	* Australia/NSW48/2020
	* Australia/NSW50/2020
	* Australia/NSW52/2020
	* Australia/NSW53/2020
	* Australia/NSW54/2020
	* Australia/NSW56/2020
	* Australia/NSW57/2020
	* Australia/NSW58/2020
	* Australia/NSW61/2020
	* Australia/NSW62/2020

* Centre for Infectious Diseases and Microbiology- Public Health
	* Australia/NSW11/2020

* Centro Hospital do Porto, E.P.E. - H. Geral de Santo Antonio
	* Portugal/CV62/2020

* Centro Hospitalar e Universitario de Sao Joao, Porto
	* Portugal/CV63/2020

* Charite Universitatsmedizin Berlin, Institute of Virology; Institut fur Mikrobiologie der Bundeswehr, Munich
	* Germany/BavPat1/2020

* Chiu Laboratory, University of California, San Francisco
	* USA/CA-CDPH-UC12/2020
	* USA/CA-CDPH-UC26/2020
	* USA/CA-CDPH-UC27/2020
	* USA/CA-CDPH-UC28/2020

* Clinica Alemana de Santiago, Chile
	* Chile/Santiago-1/2020

* Clinica Santa Maria, Santiago, Chile
	* Chile/Santiago-2/2020

* Clinical Microbiology Lab
	* SaudiArabia/KAIMRC-Alghoribi/2020

* Connecticut State Department of Public Health
	* USA/CT-Yale-001/2020
	* USA/CT-Yale-002/2020
	* USA/CT-Yale-003/2020
	* USA/CT-Yale-005/2020

* Dasman Diabetes Institute
	* Kuwait/KU17/2020
	* Kuwait/KU18/2020

* Dasman Diabetes Institute and Virology Laboratory Ministry of Health
	* Kuwait/KU09/2020

* Department of Clinical Microbiology
	* Belgium/ULG-2971/2020
	* Belgium/ULG-3000/2020
	* Belgium/ULG-3162/2020
	* Belgium/ULG-3163/2020
	* Belgium/ULG-3662/2020
	* Belgium/ULG-3665/2020
	* Belgium/ULG-3683/2020
	* Belgium/ULG-3843/2020
	* Belgium/ULG-4163/2020
	* Belgium/ULG-6216/2020
	* Belgium/ULG-6457/2020
	* Belgium/ULG-6503/2020
	* Belgium/ULG-6638/2020
	* Belgium/ULG-6670/2020
	* Belgium/ULG-6754/2020
	* Belgium/ULG-6939/2020
	* Belgium/ULG-6942/2020
	* Belgium/ULG-6948/2020
	* Belgium/ULG-6950/2020
	* Belgium/ULG-6972/2020
	* Belgium/ULG-7019/2020

* Department of Clinical Pathology, Pamela Youde Nethersole Eastern Hospital
	* HongKong/Case23_26012020/2020
	* HongKong/Case27_30012020/2020
	* HongKong/Case29_01022020/2020
	* HongKong/Case30_29012020/2020
	* HongKong/Case31_28012020/2020
	* HongKong/Case32_04022020/2020
	* HongKong/Case33_02022020/2020
	* HongKong/Case34_30012020/2020
	* HongKong/Case35_04022020/2020

* Department of Infectious Diseases, Istituto Superiore di Sanita, Roma , Italy
	* Italy/CDG1/2020

* Department of Infectious Diseases, Istituto Superiore di Sanita, Rome, Italy
	* Italy/SPL1/2020

* Department of Infectious and Tropical Diseases, Bichat Claude Bernard Hospital, Paris
	* France/IDF0372-isl/2020
	* France/IDF0372/2020
	* France/IDF0373/2020
	* France/IDF0386-islP1/2020
	* France/IDF0386-islP3/2020
	* France/IDF0515-isl/2020
	* France/IDF0515/2020
	* France/IDF0571/2020

* Department of Internal Medicine, Triemli Hospital
	* Switzerland/1000477102/2020
	* Switzerland/1000477377/2020

* Department of Laboratory Medicine, National Taiwan University Hospital
	* Taiwan/NTU01/2020
	* Taiwan/NTU02/2020
	* Taiwan/NTU03/2020

* Department of Microbiology, Faculty of Medicine, The Chinese University of Hong Kong, Hong Kong SAR, China
	* HongKong/CUHK1/2020
	* HongKong/CUHK2/2020

* Department of Microbiology, Institute for Viral Diseases, College of Medicine, Korea University
	* SouthKorea/KUMC01/2020
	* SouthKorea/KUMC02/2020
	* SouthKorea/KUMC04/2020
	* SouthKorea/KUMC06/2020

* Department of Pathology, Princess Margaret Hospital
	* HongKong/Case12_22012020/2020
	* HongKong/Case1_21012020/2020
	* HongKong/Case2_18012020/2020
	* HongKong/Case6_21012020/2020

* Department of Pathology, Toshima Hospital
	* Japan/TK/20-31-3/2020

* Department of Pathology, United Christian Hospital
	* HongKong/Case17_22012020/2020
	* HongKong/Case19_04022020/2020
	* HongKong/Case20_30012020/2020
	* HongKong/Case28_30012020/2020

* Department of Virology III, National Institute of Infectious Diseases
	* Japan/AI/I-004/2020

* Department of Virology and Immunology, University of Helsinki and Helsinki University Hospital, Huslab Finland
	* Finland/FIN-114/2020
	* Finland/FIN-266/2020
	* Finland/FIN-274/2020
	* Finland/FIN-313/2020
	* Finland/FIN-318/2020
	* Finland/FIN-455/2020
	* Finland/FIN-508/2020
	* Finland/FIN01032020/2020
	* Finland/FIN03032020A/2020
	* Finland/FIN03032020B/2020
	* Finland/FIN03032020C/2020

* Department of Virus and Microbiological Special diagnostics, Statens Serum Institut, Copenhagen, Denmark.
	* Denmark/SSI-01/2020
	* Denmark/SSI-02/2020
	* Denmark/SSI-03/2020
	* Denmark/SSI-04/2020
	* Denmark/SSI-05/2020
	* Denmark/SSI-09/2020
	* Denmark/SSI-101/2020
	* Denmark/SSI-102/2020
	* Denmark/SSI-104/2020

* Department of microbiology laboratory,Anhui Provincial Center for Disease Control and Prevention
	* Anhui/SZ005/2020

* Dept. of Pathology, National Institute of Infectious Diseases
	* Japan/NA-20-05-1/2020
	* Japan/OS-20-07-1/2020

* Dept. of Virology III, National Institute of Infectious Diseases
	* Japan/KY-V-029/2020
	* Japan/TY-WK-012/2020
	* Japan/TY-WK-501/2020
	* Japan/TY-WK-521/2020

* Dienst Gezondheid & Jeugd Zuid-Holland Zuid
	* Netherlands/Hardinxveld_Giessendam_1364806/2020

* Division of Infectious Diseases, Department of Internal Medicine, Korea University College of Medicine
	* SouthKorea/KUMC03/2020
	* SouthKorea/KUMC05/2020

* Division of Infectious Diseases, University Hospital Zurich
	* Switzerland/1000477796/2020
	* Switzerland/1000477797/2020
	* Switzerland/1000477806/2020

* Division of Viral Diseases, Center for Laboratory Control of Infectious Diseases, Korea Centers for Diseases Control and Prevention
	* SouthKorea/KCDC05/2020
	* SouthKorea/KCDC06/2020
	* SouthKorea/KCDC07/2020
	* SouthKorea/KCDC12/2020
	* SouthKorea/KCDC24/2020

* Dunedin Hospital
	* NewZealand/CoV001/2020
	* NewZealand/CoV002/2020

* Dutch COVID-19 response team
	* Netherlands/Flevoland_1/2020
	* Netherlands/Gelderland_1/2020
	* Netherlands/Gelderland_2/2020
	* Netherlands/Gelderland_3/2020
	* Netherlands/Limburg_2/2020
	* Netherlands/Limburg_3/2020
	* Netherlands/Limburg_4/2020
	* Netherlands/Limburg_5/2020
	* Netherlands/Limburg_6/2020
	* Netherlands/Limburg_7/2020
	* Netherlands/NA_1/2020
	* Netherlands/NA_10/2020
	* Netherlands/NA_11/2020
	* Netherlands/NA_12/2020
	* Netherlands/NA_13/2020
	* Netherlands/NA_14/2020
	* Netherlands/NA_15/2020
	* Netherlands/NA_16/2020
	* Netherlands/NA_17/2020
	* Netherlands/NA_18/2020
	* Netherlands/NA_19/2020
	* Netherlands/NA_2/2020
	* Netherlands/NA_20/2020
	* Netherlands/NA_21/2020
	* Netherlands/NA_22/2020
	* Netherlands/NA_23/2020
	* Netherlands/NA_24/2020
	* Netherlands/NA_25/2020
	* Netherlands/NA_26/2020
	* Netherlands/NA_27/2020
	* Netherlands/NA_28/2020
	* Netherlands/NA_29/2020
	* Netherlands/NA_30/2020
	* Netherlands/NA_31/2020
	* Netherlands/NA_32/2020
	* Netherlands/NA_33/2020
	* Netherlands/NA_34/2020
	* Netherlands/NA_35/2020
	* Netherlands/NA_4/2020
	* Netherlands/NA_5/2020
	* Netherlands/NA_6/2020
	* Netherlands/NA_7/2020
	* Netherlands/NA_8/2020
	* Netherlands/NA_9/2020
	* Netherlands/NoordBrabant_1/2020
	* Netherlands/NoordBrabant_10/2020
	* Netherlands/NoordBrabant_11/2020
	* Netherlands/NoordBrabant_12/2020
	* Netherlands/NoordBrabant_13/2020
	* Netherlands/NoordBrabant_14/2020
	* Netherlands/NoordBrabant_15/2020
	* Netherlands/NoordBrabant_16/2020
	* Netherlands/NoordBrabant_17/2020
	* Netherlands/NoordBrabant_18/2020
	* Netherlands/NoordBrabant_19/2020
	* Netherlands/NoordBrabant_2/2020
	* Netherlands/NoordBrabant_20/2020
	* Netherlands/NoordBrabant_21/2020
	* Netherlands/NoordBrabant_22/2020
	* Netherlands/NoordBrabant_23/2020
	* Netherlands/NoordBrabant_24/2020
	* Netherlands/NoordBrabant_25/2020
	* Netherlands/NoordBrabant_26/2020
	* Netherlands/NoordBrabant_27/2020
	* Netherlands/NoordBrabant_28/2020
	* Netherlands/NoordBrabant_29/2020
	* Netherlands/NoordBrabant_3/2020
	* Netherlands/NoordBrabant_30/2020
	* Netherlands/NoordBrabant_31/2020
	* Netherlands/NoordBrabant_32/2020
	* Netherlands/NoordBrabant_33/2020
	* Netherlands/NoordBrabant_34/2020
	* Netherlands/NoordBrabant_35/2020
	* Netherlands/NoordBrabant_36/2020
	* Netherlands/NoordBrabant_37/2020
	* Netherlands/NoordBrabant_38/2020
	* Netherlands/NoordBrabant_39/2020
	* Netherlands/NoordBrabant_4/2020
	* Netherlands/NoordBrabant_41/2020
	* Netherlands/NoordBrabant_42/2020
	* Netherlands/NoordBrabant_44/2020
	* Netherlands/NoordBrabant_45/2020
	* Netherlands/NoordBrabant_46/2020
	* Netherlands/NoordBrabant_47/2020
	* Netherlands/NoordBrabant_48/2020
	* Netherlands/NoordBrabant_49/2020
	* Netherlands/NoordBrabant_5/2020
	* Netherlands/NoordBrabant_51/2020
	* Netherlands/NoordBrabant_52/2020
	* Netherlands/NoordBrabant_53/2020
	* Netherlands/NoordBrabant_54/2020
	* Netherlands/NoordBrabant_55/2020
	* Netherlands/NoordBrabant_56/2020
	* Netherlands/NoordBrabant_57/2020
	* Netherlands/NoordBrabant_58/2020
	* Netherlands/NoordBrabant_59/2020
	* Netherlands/NoordBrabant_6/2020
	* Netherlands/NoordBrabant_60/2020
	* Netherlands/NoordBrabant_61/2020
	* Netherlands/NoordBrabant_62/2020
	* Netherlands/NoordBrabant_63/2020
	* Netherlands/NoordBrabant_64/2020
	* Netherlands/NoordBrabant_65/2020
	* Netherlands/NoordBrabant_66/2020
	* Netherlands/NoordBrabant_67/2020
	* Netherlands/NoordBrabant_68/2020
	* Netherlands/NoordHolland_1/2020
	* Netherlands/NoordHolland_2/2020
	* Netherlands/NoordHolland_3/2020
	* Netherlands/Overijssel_1/2020
	* Netherlands/Overijssel_2/2020
	* Netherlands/Utrecht_1/2020
	* Netherlands/Utrecht_10/2020
	* Netherlands/Utrecht_11/2020
	* Netherlands/Utrecht_12/2020
	* Netherlands/Utrecht_13/2020
	* Netherlands/Utrecht_14/2020
	* Netherlands/Utrecht_15/2020
	* Netherlands/Utrecht_16/2020
	* Netherlands/Utrecht_17/2020
	* Netherlands/Utrecht_18/2020
	* Netherlands/Utrecht_19/2020
	* Netherlands/Utrecht_2/2020
	* Netherlands/Utrecht_3/2020
	* Netherlands/Utrecht_4/2020
	* Netherlands/Utrecht_5/2020
	* Netherlands/Utrecht_6/2020
	* Netherlands/Utrecht_7/2020
	* Netherlands/Utrecht_8/2020
	* Netherlands/ZuidHolland_1/2020
	* Netherlands/ZuidHolland_10/2020
	* Netherlands/ZuidHolland_11/2020
	* Netherlands/ZuidHolland_13/2020
	* Netherlands/ZuidHolland_14/2020
	* Netherlands/ZuidHolland_15/2020
	* Netherlands/ZuidHolland_16/2020
	* Netherlands/ZuidHolland_17/2020
	* Netherlands/ZuidHolland_18/2020
	* Netherlands/ZuidHolland_19/2020
	* Netherlands/ZuidHolland_2/2020
	* Netherlands/ZuidHolland_20/2020
	* Netherlands/ZuidHolland_21/2020
	* Netherlands/ZuidHolland_22/2020
	* Netherlands/ZuidHolland_23/2020
	* Netherlands/ZuidHolland_24/2020
	* Netherlands/ZuidHolland_25/2020
	* Netherlands/ZuidHolland_26/2020
	* Netherlands/ZuidHolland_27/2020
	* Netherlands/ZuidHolland_28/2020
	* Netherlands/ZuidHolland_29/2020
	* Netherlands/ZuidHolland_30/2020
	* Netherlands/ZuidHolland_31/2020
	* Netherlands/ZuidHolland_5/2020
	* Netherlands/ZuidHolland_6/2020
	* Netherlands/ZuidHolland_7/2020
	* Netherlands/ZuidHolland_8/2020
	* Netherlands/ZuidHolland_9/2020

* ErasmusMC
	* Netherlands/Nieuwendijk_1363582/2020
	* Netherlands/Rotterdam_1363790/2020

* FUNDACION JIMENEZ DIAZ
	* Spain/Madrid201442/2020

* Foundation Elisabeth-Tweesteden Ziekenhuis
	* Netherlands/Tilburg_1363354/2020
	* Netherlands/Tilburg_1364286/2020

* Foundation Pamm
	* Netherlands/Berlicum_1363564/2020

* Fujian Center for Disease Control and Prevention
	* Fujian/13/2020
	* Fujian/8/2020

* General Hospital of Central Theater Command of People's Liberation Army of China
	* Wuhan/WH01/2019
	* Wuhan/WH02/2019
	* Wuhan/WH03/2020
	* Wuhan/WH04/2020

* Gorgas Memorial Institute for Health Studies
	* Panama/328677/2020

* Guangdong Provincial Center for Diseases Control and Prevention; Guangdong Provincial Public Health
	* Foshan/20SF207/2020
	* Foshan/20SF210/2020
	* Foshan/20SF211/2020
	* Guangdong/20SF012/2020
	* Guangdong/20SF013/2020
	* Guangdong/20SF014/2020
	* Guangdong/20SF025/2020
	* Guangdong/20SF028/2020
	* Guangdong/20SF040/2020

* Guangdong Provincial Center for Diseases Control and Prevention; Guangdong Provinical Public Health
	* Guangdong/20SF174/2020
	* Guangzhou/20SF206/2020

* Guangdong Provincial Center for Diseases Control and Prevention;Guangdong Provincial Institute of Public Health
	* Guangdong/20SF201/2020

* Guangdong Provincial Institution of Public Health, Guangdong Provinical Center for Disease Control and Prevention
	* Guangdong/2020XN4239-P0034/2020
	* Guangdong/2020XN4243-P0035/2020
	* Guangdong/2020XN4273-P0036/2020
	* Guangdong/2020XN4276-P0037/2020
	* Guangdong/2020XN4291-P0038/2020
	* Guangdong/2020XN4373-P0039/2020
	* Guangdong/2020XN4433-P0040/2020
	* Guangdong/2020XN4448-P0002/2020
	* Guangdong/2020XN4459-P0041/2020
	* Guangdong/2020XN4475-P0042/2020
	* Guangdong/DG-S2-P0054/2020
	* Guangdong/DG-S41-P0056/2020
	* Guangdong/DG-S6-P0055/2020
	* Guangdong/DG-S9-P0045/2020
	* Guangdong/FS-S29-P0051/2020
	* Guangdong/FS-S30-P0052/2020
	* Guangdong/FS-S34-P0015/2020
	* Guangdong/FS-S42-P0046/2020
	* Guangdong/FS-S48-P0047/2020
	* Guangdong/FS-S50-P0053/2020
	* Guangdong/GD2020012-P0022/2020
	* Guangdong/GD2020016-P0011/2020
	* Guangdong/GD2020080-P0010/2020
	* Guangdong/GD2020085-P0043/2020
	* Guangdong/GD2020086-P0021/2020
	* Guangdong/GD2020087-P0008/2020
	* Guangdong/GD2020115-P0009/2020
	* Guangdong/GD2020134-P0031/2020
	* Guangdong/GD2020139-P0007/2020
	* Guangdong/GD2020227-P0029/2020
	* Guangdong/GD2020233-P0027/2020
	* Guangdong/GD2020234-P0023/2020
	* Guangdong/GD2020241-P0013/2020
	* Guangdong/GD2020246-P0028/2020
	* Guangdong/GD2020258-P0018/2020
	* Guangdong/GDFS2020052-P0025/2020
	* Guangdong/GDFS2020054-P0005/2020
	* Guangdong/GDFS2020056-P0044/2020
	* Guangdong/GDFS2020127-P0026/2020
	* Guangdong/GDSZ202004-P0004/2020
	* Guangdong/GDSZ202008-P0020/2020
	* Guangdong/GDSZ202009-P0032/2020
	* Guangdong/GDSZ202013-P0014/2020
	* Guangdong/GDSZ202015-P0019/2020
	* Guangdong/GZ-S6-P0050/2020
	* Guangdong/JM-S1-P0062/2020
	* Guangdong/MM-S1-P0048/2020
	* Guangdong/SZ-N128-P0057/2020
	* Guangdong/SZ-N59-P0049/2020
	* Guangdong/ZH-N22-P0059/2020
	* Guangdong/ZH-S33-P0058/2020
	* Guangdong/ZQ-S2-P0061/2020
	* Guangdong/ZS-S6-P0060/2020

* HOSPITAL SANTA MARIA NAI
	* Spain/Galicia201663/2020

* HUS Diagnostiikkakeskus, Hallinto
	* Finland/FIN-25/2020

* Hangzhou Center for Disease Control and Prevention
	* Hangzhou/HZCDC0001/2020

* Hangzhou Center for Disease and Control Microbiology Lab
	* Hangzhou/HZ-1/2020

* Harborview Medical Center
	* USA/WA3-UW1/2020
	* USA/WA9-UW6/2020

* Hong Kong Department of Health
	* HongKong/VB20024950/2020
	* HongKong/VB20026565/2020
	* HongKong/VM20001061/2020
	* HongKong/case42_VM20002493/2020
	* HongKong/case48_VM20002507/2020
	* HongKong/case49_VM20002508/2020
	* HongKong/case52_VM20002582/2020
	* HongKong/case78_VM20002849/2020
	* HongKong/case85_VM20002868/2020
	* HongKong/case90_VM20002907/2020

* Hopital Instruction des Armees - BEGIN
	* France/IDF2075/2020

* Hopital Robert Debre Laboratoire de Virologie
	* France/GE1973/2020
	* France/GE1977/2020

* Hopital franco britannique - Service des Urgences
	* France/IDF2284/2020

* Hopitaux universitaires de Geneve Laboratoire de Virologie
	* Switzerland/AG7120/2020
	* Switzerland/BE2536/2020
	* Switzerland/BE6651/2020
	* Switzerland/BS0914/2020
	* Switzerland/GE0199/2020
	* Switzerland/GE06207/2020
	* Switzerland/GE1402/2020
	* Switzerland/GE1422/2020
	* Switzerland/GE4135/2020
	* Switzerland/GE4984/2020
	* Switzerland/GE6679/2020
	* Switzerland/GE8102/2020
	* Switzerland/GR2988/2020
	* Switzerland/GR3043/2020
	* Switzerland/SZ1417/2020
	* Switzerland/TI2045/2020
	* Switzerland/VD0503/2020

* Hospital Israelita Albert Einstein
	* Brazil/SPBR-01/2020
	* Brazil/SPBR-02/2020
	* Brazil/SPBR-03/2020
	* Brazil/SPBR-11/2020
	* Brazil/SPBR-12/2020

* Hospital Sao Joaquim Beneficencia Portuguesa
	* Brazil/SPBR-04/2020
	* Brazil/SPBR-05/2020
	* Brazil/SPBR-06/2020

* Hospital de Talca, Chile
	* Chile/Talca-1/2020
	* Chile/Talca-2/2020

* IL Department of Public Health Chicago Laboratory
	* USA/IL1/2020
	* USA/IL2/2020

* INMI Lazzaro Spallanzani IRCCS
	* Italy/INMI1-cs/2020
	* Italy/INMI1-isl/2020

* Indian Council of Medical Research - National Institute of Virology
	* India/1-27/2020

* Indian Council of Medical Research-National Institute of Virology
	* India/1-31/2020

* Institut Medico legal- Hop R. Poincare
	* France/IDF2256/2020

* Institut des Agents Infectieux (IAI) Hospices Civils de Lyon
	* France/Lyon_06464/2020
	* France/Lyon_06487/2020
	* France/Lyon_06531/2020
	* France/Lyon_0693/2020
	* France/Lyon_487/2020
	* France/Lyon_508/2020
	* France/Lyon_683/2020

* Institut des Agents Infectieux (IAI), Hospices Civils de Lyon
	* France/Lyon_06042/2020
	* France/Lyon_06056/2020
	* France/Lyon_06573/2020
	* France/Lyon_06625/2020
	* France/Lyon_0668/2020
	* France/Lyon_06820/2020

* Institute of Pathogen Biology, Chinese Academy of Medical Sciences & Peking Union Medical College
	* Wuhan/IPBCAMS-WH-01/2019
	* Wuhan/IPBCAMS-WH-02/2019
	* Wuhan/IPBCAMS-WH-03/2019
	* Wuhan/IPBCAMS-WH-04/2019
	* Wuhan/IPBCAMS-WH-05/2020

* Institute of Viral Disease Control and Prevention, China CDC
	* Wuhan/IVDC-HB-envF13-20/2020
	* Wuhan/IVDC-HB-envF13-21/2020
	* Wuhan/IVDC-HB-envF13/2020
	* Wuhan/IVDC-HB-envF54/2020

* Instituto Nacional de Enfermedades Respiratorias
	* Mexico/CDMX-InDRE_01/2020

* Japanese Quarantine Stations
	* Japan/DP0005/2020
	* Japan/DP0027/2020
	* Japan/DP0037/2020
	* Japan/DP0058/2020
	* Japan/DP0059/2020
	* Japan/DP0065/2020
	* Japan/DP0077/2020
	* Japan/DP0078/2020
	* Japan/DP0104/2020
	* Japan/DP0107/2020
	* Japan/DP0121/2020
	* Japan/DP0133/2020
	* Japan/DP0134/2020
	* Japan/DP0152/2020
	* Japan/DP0158/2020
	* Japan/DP0184/2020
	* Japan/DP0190/2020
	* Japan/DP0191/2020
	* Japan/DP0196/2020
	* Japan/DP0200/2020
	* Japan/DP0236/2020
	* Japan/DP0274/2020
	* Japan/DP0278/2020
	* Japan/DP0286/2020
	* Japan/DP0287/2020
	* Japan/DP0289/2020
	* Japan/DP0290/2020
	* Japan/DP0294/2020
	* Japan/DP0311/2020
	* Japan/DP0319/2020
	* Japan/DP0328/2020
	* Japan/DP0344/2020
	* Japan/DP0346/2020
	* Japan/DP0357/2020
	* Japan/DP0361/2020
	* Japan/DP0438/2020
	* Japan/DP0457/2020
	* Japan/DP0462/2020
	* Japan/DP0464/2020
	* Japan/DP0476/2020
	* Japan/DP0481/2020
	* Japan/DP0482/2020
	* Japan/DP0543/2020
	* Japan/DP0544/2020
	* Japan/DP0568/2020
	* Japan/DP0588/2020
	* Japan/DP0644/2020
	* Japan/DP0645/2020
	* Japan/DP0654/2020
	* Japan/DP0687/2020
	* Japan/DP0690/2020
	* Japan/DP0697/2020
	* Japan/DP0699/2020
	* Japan/DP0700/2020
	* Japan/DP0703/2020
	* Japan/DP0724/2020
	* Japan/DP0743/2020
	* Japan/DP0752/2020
	* Japan/DP0763/2020
	* Japan/DP0764/2020
	* Japan/DP0765/2020
	* Japan/DP0779/2020
	* Japan/DP0785/2020
	* Japan/DP0786/2020
	* Japan/DP0802/2020
	* Japan/DP0803/2020
	* Japan/DP0804/2020
	* Japan/DP0827/2020
	* Japan/DP0880/2020
	* Japan/DP0890/2020

* Jiangxi province Center for Disease Control and Prevention
	* NanChang/JX216/2020

* Jingzhou Center for Disease Control and Prevention
	* Jingzhou/HBCDC-HB-01/2020

* KU Leuven, Clincal and Epidemiological Virology
	* Belgium/BM-03012/2020

* KU Leuven, Clinical and Epidemiological Virology
	* Belgium/BA-02291/2020
	* Belgium/BC-03016/2020
	* Belgium/DB-03023/2020
	* Belgium/DBA-03032/2020
	* Belgium/DBD-03024/2020
	* Belgium/DHWM-03041/2020
	* Belgium/FR-03029/2020
	* Belgium/GHB-03021/2020
	* Belgium/GMH-03022/2020
	* Belgium/KA-03042/2020
	* Belgium/MMJ-03034/2020
	* Belgium/MTR-03021/2020
	* Belgium/MTR-03026/2020
	* Belgium/QKJ-03015/2020
	* Belgium/RT-03035/2020
	* Belgium/SH-03014/2020
	* Belgium/SN-03031/2020
	* Belgium/SQ-03043/2020
	* Belgium/UMF-03025/2020
	* Belgium/VAG-03013/2020
	* Belgium/VBK-03061/2020
	* Belgium/VI-03027/2020
	* Belgium/VLM-03011/2020

* Klinik Hirslanden Zurich
	* Switzerland/1000477757/2020

* Korea Centers for Disease Control & Prevention (KCDC) Center for Laboratory Control of Infectious Diseases Division of Viral Diseases
	* SouthKorea/KCDC03/2020

* LABM GH nord Essonne
	* France/IDF2278/2020
	* France/IDF2279/2020

* LACEN RJ - Laboratorio Central de Saude Publica Noel Nutels
	* Brazil/RJ-314/2020

* LACEN/ES - Laboratorio Central de Saude Publica do Espirito Santo
	* Brazil/ES-225/2020

* Laboiratorio Fleury
	* Brazil/SPBR-08/2020

* Laboratoire National de Sante
	* Luxembourg/Lux1/2020

* Laboratoire de Virologie Institut de Virologie - INSERM U 1109 Hopitaux Universitaires de Strasbourg
	* France/GE1583/2020

* Laboratoire de Virologie, HUG
	* Switzerland/AG0361/2020
	* Switzerland/BL0902/2020
	* Switzerland/GE3121/2020
	* Switzerland/GE3895/2020
	* Switzerland/GE5373/2020
	* Switzerland/GE9586/2020
	* Switzerland/TI9486/2020
	* Switzerland/VD5615/2020

* Laboratorio Central de Saude Publica Professor Goncalo Moniz  LACEN/BA
	* Brazil/BA-312/2020

* Laboratorio de Ecologia de Doencas Transmissiveis na Amazonia, Instituto Leonidas e Maria Deane - Fiocruz Amazonia
	* Brazil/AMBR-02/2020

* Laboratorio de Referencia Nacional de Virus Respiratorio. Instituto Nacional de Salud. Peru
	* Peru/010/2020

* Laboratorio de Referencia Nacional de Virus Respiratorios. Instituto Nacional de Salud Peru
	* Peru/01/2020

* Laboratorio di Microbiologia e Virologia, Universita Vita-Salute San Raffaele, Milano
	* Italy/UniSR1/2020

* Laboratory Medicine
	* Taiwan/CGMH-CGU-01/2020
	* Taiwan/CGMH-CGU-03/2020
	* Taiwan/CGMH-CGU-04/2020
	* Taiwan/CGMH-CGU-05/2020

* Laboratory of Molecular Virology International Center for Genetic Engineering and Biotechnology (ICGEB)
	* Italy/FVG-ICGEB_S5/2020
	* Italy/FVG-ICGEB_S8/2020
	* Italy/FVG-ICGEB_S9/2020

* Laboratory of Molecular Virology International Center fro Genetic Engineering and Biotechnology (ICGEB)
	* Italy/FVG-ICGEB_S1/2020

* Laboratory of Molecular Virology, Pontificia Universidad Catolica de Chile
	* Chile/Santiago_op2d1/2020
	* Chile/Santiago_op3d1/2020
	* Chile/Santiago_op4d1/2020

* Lapland Central Hospital
	* Finland/1/2020

* MHC Brabant Zuidoost
	* Netherlands/Eindhoven_1363782/2020

* MHC Drente
	* Netherlands/Dalen_1363624/2020

* MHC Flevoland
	* Netherlands/Zeewolde_1365080/2020

* MHC Gooi & Vechtstreek
	* Netherlands/Blaricum_1364780/2020
	* Netherlands/Naarden_1364774/2020

* MHC Haaglanden
	* Netherlands/Nootdorp_1364222/2020

* MHC Hart voor Brabant
	* Netherlands/Oisterwijk_1364072/2020

* MHC Kennemerland
	* Netherlands/Haarlem_1363688/2020

* MHC Rotterdam-Rijnmond
	* Netherlands/Rotterdam_1364040/2020

* MHC Utrecht
	* Netherlands/Utrecht_1363564/2020
	* Netherlands/Utrecht_1363628/2020
	* Netherlands/Utrecht_1364066/2020

* MHC West-Brabant
	* Netherlands/Andel_1365066/2020
	* Netherlands/Helmond_1363548/2020

* MSHS Clinical Microbiology Laboratories
	* USA/NY1-PV08001/2020
	* USA/NY2-PV08100/2020

* Massachusetts Department of Public Health
	* USA/MA1/2020

* Minnesota Department of Health, Public Health Laboratory
	* USA/MN1-MDH1/2020
	* USA/MN2-MDH2/2020
	* USA/MN25-MDH25/2020
	* USA/MN26-MDH26/2020
	* USA/MN29-MDH29/2020
	* USA/MN3-MDH3/2020
	* USA/MN30-MDH30/2020
	* USA/MN4-MDH4/2020
	* USA/MN5-MDH5/2020

* Monash Medical Centre
	* Australia/VIC01/2020

* NHC Key laboratory of Enteric Pathogenic Microbiology, Institute of Pathogenic Microbiology
	* Jiangsu/JS01/2020
	* Jiangsu/JS02/2020
	* Jiangsu/JS03/2020

* NRL for Influenza, Centrum Epidemiology and Microbiology of National Institute of Public Health, Czech Republic
	* CzechRepublic/ChVir1630/2020
	* CzechRepublic/ChVir1912/2020

* NYU Langone Health
	* USA/NY-NYUMC1/2020
	* USA/NY-NYUMC2/2020
	* USA/NY-NYUMC3/2020
	* USA/NY-NYUMC4/2020

* National Centre for Infectious Diseases
	* Singapore/12/2020
	* Singapore/13/2020
	* Singapore/14/2020
	* Singapore/3/2020
	* Singapore/4/2020

* National Influenza Center - Instituto Adolfo Lutz
	* Brazil/SPBR-07/2020
	* Brazil/SPBR-09/2020
	* Brazil/SPBR-10/2020
	* Brazil/SPBR-13/2020
	* Brazil/SPBR-14/2020

* National Influenza Center - National Institute of Hygiene and Epidemiology (NIHE)
	* Vietnam/VR03-38142/2020

* National Influenza Center, National Institute of Hygiene and Epidemiology (NIHE)
	* Vietnam/38142/2020
	* Vietnam/39607/2020
	* Vietnam/CM295/2020
	* Vietnam/CM296/2020
	* Vietnam/CM99/2020

* National Influenza Centre, National Public Health Laboratory, Kathmandu, Nepal
	* Nepal/61/2020

* National Institute for Communicable Diseases of the National Health Laboratory Service
	* SouthAfrica/R03006-20/2020

* National Institute for Viral Disease Control and Prevention, China CDC
	* Beijing/IVDC-BJ-005/2020
	* Chongqing/IVDC-CQ-001/2020
	* Henan/IVDC-HeN-002/2020
	* Jiangsu/IVDC-JS-001/2020
	* Jiangxi/IVDC-JX-002/2020
	* Shandong/IVDC-SD-001/2020
	* Shanghai/IVDC-SH-001/2020
	* Sichuan/IVDC-SC-001/2020
	* Wuhan/IVDC-HB-01/2019
	* Wuhan/IVDC-HB-04/2020
	* Wuhan/IVDC-HB-05/2019
	* Yunnan/IVDC-YN-003/2020

* National Public Health Laboratory
	* Malaysia/MKAK-CL-2020-5045/2020
	* Malaysia/MKAK-CL-2020-5047/2020
	* Malaysia/MKAK-CL-2020-5049/2020
	* Malaysia/MKAK-CL-2020-5096/2020
	* Malaysia/MKAK-CL-2020-6430/2020
	* Malaysia/MKAK-CL-2020-7554/2020
	* Singapore/11/2020

* National Public Health Laboratory, National Centre for Infectious Diseases
	* Singapore/10/2020
	* Singapore/7/2020
	* Singapore/8/2020
	* Singapore/9/2020

* National Public Health Surveillance Laboratory, Vilnius, Lithuania
	* Lithuania/ChVir1632/2020

* Pathology Queensland
	* Australia/QLD01/2020
	* Australia/QLD02/2020
	* Australia/QLD03/2020
	* Australia/QLD04/2020
	* Australia/QLD09/2020
	* Australia/QLDID919/2020

* Prince of Wales Hospital
	* HongKong/case2_VB20017970/2020

* Providence Regional Medical Center
	* USA/WA1/2020

* Public Health Laboratory
	* SaudiArabia/SCDC-3321/2020

* Public Health Laboratory, Saudi CDC
	* SaudiArabia/SCDC-3324/2020

* Public Health Ontario Laboratory
	* Canada/ON-PHL2445/2020
	* Canada/ON-VIDO-01/2020

* R. G. Lugar Center for Public Health Research,  National Center for Disease Control and Public Health (NCDC) of Georgia.
	* Georgia/Tb-273/2020
	* Georgia/Tb-390/2020
	* Georgia/Tb-468/2020
	* Georgia/Tb-477/2020
	* Georgia/Tb-537/2020
	* Georgia/Tb-54/2020
	* Georgia/Tb-673/2020
	* Georgia/Tb-712/2020
	* Georgia/Tb-82/2020
	* Georgia/Tb/2020

* RIVM
	* Netherlands/Delft_1363424/2020
	* Netherlands/Diemen_1363454/2020
	* Netherlands/Loon_op_zand_1363512/2020
	* Netherlands/Oss_1363500/2020
	* NetherlandsL/Houten_1363498/2020

* Regional Virus Laboratory, Belfast
	* NorthernIreland/HSCNI01/2020

* Respiratory Virus Unit, Microbiology Services Colindale, Public Health England
	* England/01/2020
	* England/02/2020
	* England/09c/2020
	* England/200641094/2020
	* England/200690245/2020
	* England/200690300/2020
	* England/200690306/2020
	* England/200690756/2020
	* England/200940527/2020
	* England/200960041/2020
	* England/200960515/2020
	* England/200981386/2020
	* England/200990002/2020
	* England/200990006/2020
	* England/20099038206/2020
	* England/200990660/2020
	* England/200990723/2020
	* England/200990724/2020
	* England/200990725/2020
	* England/20099079106/2020
	* England/20099107406/2020
	* England/200991076/2020
	* England/201000003/2020
	* England/20100001406/2020
	* England/20100004706/2020
	* England/20100004806/2020
	* England/20100005406/2020
	* England/20100022706/2020
	* England/20100023206/2020
	* England/20100024006/2020
	* England/20100077906/2020
	* England/20100121006/2020
	* England/20100121007/2020
	* England/20100122106/2020
	* England/20100122107/2020
	* England/20102000106/2020
	* England/20102000206/2020
	* England/20102000306/2020
	* England/20102000506/2020
	* England/20102000906/2020
	* England/20102068502/2020
	* England/20102068506/2020
	* England/20102073303/2020
	* England/20102087902/2020
	* England/20102088002/2020
	* England/20102098802/2020
	* England/20102112102/2020
	* England/20102115303/2020
	* England/20104002606/2020
	* England/20104002902/2020
	* England/20104003002/2020
	* England/20104004402/2020
	* England/20104004502/2020
	* England/20104004802/2020
	* England/20104004902/2020
	* England/20104007503/2020
	* England/201040081/2020
	* England/20104008402/2020
	* England/20104008502/2020
	* England/20104008702/2020
	* England/20104008802/2020
	* England/20104008902/2020
	* England/20104009002/2020
	* England/20104009102/2020
	* England/20104013703/2020
	* England/201040141/2020
	* England/20104015302/2020
	* England/20104023103/2020
	* England/20104035803/2020
	* England/20106003303/2020
	* England/20106004803/2020
	* England/20106004902/2020
	* England/20106005103/2020
	* England/20106005303/2020
	* England/20106005403/2020
	* England/20106087206/2020
	* England/20106145903/2020
	* England/20108003202/2020
	* England/20108003302/2020
	* England/20108004602/2020
	* England/20108004702/2020
	* England/20108004803/2020
	* England/20108006003/2020
	* England/20108006603/2020
	* England/20108006802/2020
	* England/20108007002/2020
	* England/20108007302/2020
	* England/20108007402/2020
	* England/20108034006/2020
	* England/20108125106/2020
	* England/20109035906/2020
	* England/20109038906/2020
	* England/20109039306/2020
	* England/20109050106/2020
	* England/20109050306/2020
	* England/20109050406/2020
	* England/20109050506/2020
	* England/20109050606/2020
	* England/20109050706/2020
	* England/20109050806/2020
	* England/20109051806/2020
	* England/20109051906/2020
	* England/20109052006/2020
	* England/20109052106/2020
	* England/20109052206/2020
	* England/20109052306/2020
	* England/20109052506/2020
	* England/20109053106/2020
	* England/20109053406/2020
	* England/20109053606/2020
	* England/20109054806/2020
	* England/20109056406/2020
	* England/20109056906/2020
	* England/20109058906/2020
	* England/20109060106/2020
	* England/20109093606/2020
	* England/20109093706/2020
	* England/20109093806/2020
	* England/20109093906/2020
	* England/20109094006/2020
	* England/20109094106/2020
	* England/20109094206/2020
	* England/20109094506/2020
	* England/20109097506/2020
	* England/20109097906/2020
	* England/20109098806/2020
	* England/20109098906/2020
	* England/20109099006/2020
	* England/20109099106/2020
	* England/20109099206/2020
	* England/20110000106/2020
	* England/20110000606/2020
	* England/20110000706/2020
	* England/20110000806/2020
	* England/20110000906/2020
	* England/20110003506/2020
	* England/20110005006/2020
	* England/20110015106/2020
	* England/20110023706/2020
	* England/20110042006/2020
	* England/20110042106/2020
	* England/20110043706/2020
	* England/20110058706/2020
	* England/20110059306/2020
	* England/20110097506/2020
	* England/20112112106/2020
	* England/20118044606/2020

* Rockhampton Base Hospital
	* Australia/QLDID920/2020

* Saitama Medical University
	* Japan/SMU-0311S3/2020

* Saitama Medical University Hospital
	* Japan/SMU-0311S2/2020

* Santa Clara County Public Health Department
	* USA/CA-SCCPHD-UC13/2020
	* USA/CA-SCCPHD-UC14/2020
	* USA/CA-SCCPHD-UC15/2020
	* USA/CA-SCCPHD-UC16/2020
	* USA/CA-SCCPHD-UC17/2020

* Seattle Flu Study
	* USA/WA-S10/2020
	* USA/WA-S11/2020
	* USA/WA-S110/2020
	* USA/WA-S111/2020
	* USA/WA-S112/2020
	* USA/WA-S2/2020
	* USA/WA-S3/2020
	* USA/WA-S4/2020
	* USA/WA-S5/2020
	* USA/WA-S6/2020
	* USA/WA-S7/2020
	* USA/WA-S8/2020
	* USA/WA-S9/2020

* Second Hospital of Anhui Medical University
	* Hefei/2/2020

* Serology, Virology and OTDS Laboratories (SAViD), NSW Health Pathology Randwick
	* Australia/NSW03/2020

* Servicio Microbiologia, Hospital Clinico Universitario, Valencia
	* Spain/Valencia3/2020

* Servicio Microbiologia. Hospital Clinico Universitario. Valencia.
	* Spain/Valencia1/2020
	* Spain/Valencia2/2020

* Servicio de Microbiologia. Consorcio Hospital General Universitario de Valencia
	* Spain/Valencia10/2020
	* Spain/Valencia4/2020
	* Spain/Valencia5/2020
	* Spain/Valencia6/2020
	* Spain/Valencia7/2020
	* Spain/Valencia8/2020
	* Spain/Valencia9/2020

* Shandong Provincial Center for Disease Control and Prevention
	* Shandong/LY001/2020
	* Shandong/LY002/2020
	* Shandong/LY003/2020
	* Shandong/LY004/2020
	* Shandong/LY005/2020
	* Shandong/LY006/2020
	* Shandong/LY007/2020
	* Shandong/LY008/2020

* Shanghai Public Health Clinical Center, Shanghai Medical College, Fudan University
	* Shanghai/SH0002/2020
	* Shanghai/SH0003/2020
	* Shanghai/SH0004/2020
	* Shanghai/SH0005/2020
	* Shanghai/SH0007/2020
	* Shanghai/SH0008/2020
	* Shanghai/SH0009/2020
	* Shanghai/SH0010/2020
	* Shanghai/SH0011/2020
	* Shanghai/SH0012/2020
	* Shanghai/SH0013/2020
	* Shanghai/SH0014/2020
	* Shanghai/SH0017/2020
	* Shanghai/SH0020/2020
	* Shanghai/SH0021/2020
	* Shanghai/SH0022/2020
	* Shanghai/SH0023/2020
	* Shanghai/SH0024/2020
	* Shanghai/SH0025/2020
	* Shanghai/SH0026/2020
	* Shanghai/SH0027/2020
	* Shanghai/SH0028/2020
	* Shanghai/SH0029/2020
	* Shanghai/SH0030/2020
	* Shanghai/SH0031/2020
	* Shanghai/SH0032/2020
	* Shanghai/SH0033/2020
	* Shanghai/SH0034/2020
	* Shanghai/SH0035/2020
	* Shanghai/SH0036/2020
	* Shanghai/SH0037/2020
	* Shanghai/SH0038/2020
	* Shanghai/SH0039/2020
	* Shanghai/SH0040/2020
	* Shanghai/SH0041/2020
	* Shanghai/SH0042/2020
	* Shanghai/SH0043/2020
	* Shanghai/SH0044/2020
	* Shanghai/SH0045/2020
	* Shanghai/SH0047/2020
	* Shanghai/SH0048/2020
	* Shanghai/SH0049/2020
	* Shanghai/SH0050/2020
	* Shanghai/SH0051/2020
	* Shanghai/SH0052/2020
	* Shanghai/SH0053/2020
	* Shanghai/SH0054/2020
	* Shanghai/SH0055/2020
	* Shanghai/SH0056/2020
	* Shanghai/SH0058/2020
	* Shanghai/SH0059/2020
	* Shanghai/SH0060/2020
	* Shanghai/SH0065/2020
	* Shanghai/SH0066/2020
	* Shanghai/SH0067/2020
	* Shanghai/SH0068/2020
	* Shanghai/SH0069/2020
	* Shanghai/SH0070/2020
	* Shanghai/SH0071/2020
	* Shanghai/SH0072/2020
	* Shanghai/SH0073/2020
	* Shanghai/SH0074/2020
	* Shanghai/SH0075/2020
	* Shanghai/SH0076/2020
	* Shanghai/SH0077/2020
	* Shanghai/SH0079/2020
	* Shanghai/SH0080/2020
	* Shanghai/SH0081/2020
	* Shanghai/SH0083/2020
	* Shanghai/SH0085/2020
	* Shanghai/SH0086/2020
	* Shanghai/SH0088/2020
	* Shanghai/SH0091/2020
	* Shanghai/SH0093/2020
	* Shanghai/SH0094/2020
	* Shanghai/SH0098/2020
	* Shanghai/SH0100/2020
	* Shanghai/SH0101/2020
	* Shanghai/SH0102/2020
	* Shanghai/SH0104/2020
	* Shanghai/SH0106/2020
	* Shanghai/SH0107/2020
	* Shanghai/SH0109/2020
	* Shanghai/SH0110/2020
	* Shanghai/SH0112/2020
	* Shanghai/SH0114/2020
	* Shanghai/SH0115/2020
	* Shanghai/SH0117/2020
	* Shanghai/SH0119/2020
	* Shanghai/SH0121/2020
	* Shanghai/SH0125/2020
	* Shanghai/SH0126/2020
	* Shanghai/SH0127/2020
	* Shanghai/SH0128/2020

* Shenzhen Key Laboratory of Pathogen and Immunity, National Clinical Research Center for Infectious Disease, Shenzhen Third People's Hospital
	* Shenzhen/SZTH-002/2020
	* Shenzhen/SZTH-003/2020
	* Shenzhen/SZTH-004/2020

* Shenzhen Third People's Hospital
	* Shenzhen/SZTH-001/2020

* Singapore General Hospital
	* Singapore/1/2020
	* Singapore/2/2020

* Singapore General Hospital, Molecular Laboratory, Division of Pathology
	* Singapore/5/2020
	* Singapore/6/2020

* Sorbonne Universite, Inserm et Assistance Publique-Hopitaux de Paris (Pitie Salpetriere)
	* France/IDF0626/2020

* South China Agricultural University
	* pangolin/Guangdong/1/2019

* State Health Office Baden-Wuerttemberg
	* Germany/Baden-Wuerttemberg-1/2020

* State Key Laboratory for Diagnosis and Treatment of Infectious Diseases, National Clinical Research Center for Infectious Diseases, First Affiliated Hospital, Zhejiang University School of Medicine, Hangzhou, China 310003
	* Hangzhou/ZJU-03/2020
	* Hangzhou/ZJU-04/2020
	* Hangzhou/ZJU-06/2020
	* Hangzhou/ZJU-07/2020
	* Hangzhou/ZJU-08/2020
	* Hangzhou/ZJU-09/2020

* State Key Laboratory for Diagnosis and Treatment of Infectious Diseases, National Clinical Research Center for Infectious Diseases, First Affiliated Hospital, Zhejiang University School of Medicine, Hangzhou, China. 310003
	* Hangzhou/ZJU-01/2020
	* Hangzhou/ZJU-02/2020
	* Hangzhou/ZJU-05/2020

* State Key Laboratory of Respiratory Disease, National Clinical Research Center for Respiratory Disease, Guangzhou Institute of Respiratory Health, the First Affiliated Hospital of Guangzhou Medical University
	* Guangzhou/GZMU0014/2020
	* Guangzhou/GZMU0016/2020
	* Guangzhou/GZMU0030/2020
	* Guangzhou/GZMU0031/2020
	* Guangzhou/GZMU0042/2020
	* Guangzhou/GZMU0044/2020
	* Guangzhou/GZMU0047/2020
	* Guangzhou/GZMU0048/2020

* Sullivan Nicolaides Pathology
	* Australia/QLDID921/2020

* Tai Lung Veterinary Laboratory, Agriculture, Fisheries and Conservation Department
	* canine/HongKong/20-02756/2020

* Taiwan Centers for Disease Control
	* Taiwan/3/2020
	* Taiwan/4/2020

* Texas Department of State Health Services
	* USA/TX1/2020

* The Central Hospital Of Wuhan
	* Wuhan/HBCDC-HB-02/2020

* The National Institute of Public Health Center for Epidemiology and Microbiology
	* CzechRepublic/951/2020

* The University of Hong Kong - Shenzhen Hospital
	* Shenzhen/HKU-SZ-002/2020
	* Shenzhen/HKU-SZ-005/2020

* Tianmen Center for Disease Control and Prevention
	* Tianmen/HBCDC-HB-07/2020

* UCD National Virus Reference Laboratory
	* Ireland/COR-20134/2020
	* Ireland/Cork2/2020
	* Ireland/Dublin-19072/2020
	* Ireland/Limerick-19933/2020
	* Ireland/Limerick-19934/2020
	* Ireland/Limerick-19935/2020

* UW Virology Lab
	* USA/WA-UW100/2020
	* USA/WA-UW101/2020
	* USA/WA-UW102/2020
	* USA/WA-UW103/2020
	* USA/WA-UW104/2020
	* USA/WA-UW105/2020
	* USA/WA-UW106/2020
	* USA/WA-UW107/2020
	* USA/WA-UW108/2020
	* USA/WA-UW109/2020
	* USA/WA-UW110/2020
	* USA/WA-UW111/2020
	* USA/WA-UW112/2020
	* USA/WA-UW113/2020
	* USA/WA-UW114/2020
	* USA/WA-UW115/2020
	* USA/WA-UW116/2020
	* USA/WA-UW117/2020
	* USA/WA-UW118/2020
	* USA/WA-UW119/2020
	* USA/WA-UW120/2020
	* USA/WA-UW121/2020
	* USA/WA-UW122/2020
	* USA/WA-UW123/2020
	* USA/WA-UW124/2020
	* USA/WA-UW125/2020
	* USA/WA-UW126/2020
	* USA/WA-UW127/2020
	* USA/WA-UW128/2020
	* USA/WA-UW129/2020
	* USA/WA-UW130/2020
	* USA/WA-UW131/2020
	* USA/WA-UW132/2020
	* USA/WA-UW133/2020
	* USA/WA-UW134/2020
	* USA/WA-UW135/2020
	* USA/WA-UW136/2020
	* USA/WA-UW137/2020
	* USA/WA-UW138/2020
	* USA/WA-UW139/2020
	* USA/WA-UW140/2020
	* USA/WA-UW141/2020
	* USA/WA-UW142/2020
	* USA/WA-UW143/2020
	* USA/WA-UW144/2020
	* USA/WA-UW145/2020
	* USA/WA-UW146/2020
	* USA/WA-UW147/2020
	* USA/WA-UW148/2020
	* USA/WA-UW149/2020
	* USA/WA-UW15/2020
	* USA/WA-UW150/2020
	* USA/WA-UW151/2020
	* USA/WA-UW152/2020
	* USA/WA-UW153/2020
	* USA/WA-UW154/2020
	* USA/WA-UW155/2020
	* USA/WA-UW156/2020
	* USA/WA-UW157/2020
	* USA/WA-UW158/2020
	* USA/WA-UW159/2020
	* USA/WA-UW16/2020
	* USA/WA-UW160/2020
	* USA/WA-UW161/2020
	* USA/WA-UW162/2020
	* USA/WA-UW163/2020
	* USA/WA-UW164/2020
	* USA/WA-UW165/2020
	* USA/WA-UW166/2020
	* USA/WA-UW167/2020
	* USA/WA-UW168/2020
	* USA/WA-UW169/2020
	* USA/WA-UW17/2020
	* USA/WA-UW170/2020
	* USA/WA-UW171/2020
	* USA/WA-UW172/2020
	* USA/WA-UW173/2020
	* USA/WA-UW174/2020
	* USA/WA-UW175/2020
	* USA/WA-UW176/2020
	* USA/WA-UW177/2020
	* USA/WA-UW178/2020
	* USA/WA-UW179/2020
	* USA/WA-UW18/2020
	* USA/WA-UW180/2020
	* USA/WA-UW181/2020
	* USA/WA-UW182/2020
	* USA/WA-UW183/2020
	* USA/WA-UW184/2020
	* USA/WA-UW185/2020
	* USA/WA-UW186/2020
	* USA/WA-UW187/2020
	* USA/WA-UW188/2020
	* USA/WA-UW189/2020
	* USA/WA-UW19/2020
	* USA/WA-UW190/2020
	* USA/WA-UW191/2020
	* USA/WA-UW192/2020
	* USA/WA-UW193/2020
	* USA/WA-UW194/2020
	* USA/WA-UW195/2020
	* USA/WA-UW196/2020
	* USA/WA-UW197/2020
	* USA/WA-UW198/2020
	* USA/WA-UW199/2020
	* USA/WA-UW20/2020
	* USA/WA-UW200/2020
	* USA/WA-UW201/2020
	* USA/WA-UW202/2020
	* USA/WA-UW203/2020
	* USA/WA-UW204/2020
	* USA/WA-UW205/2020
	* USA/WA-UW206/2020
	* USA/WA-UW207/2020
	* USA/WA-UW208/2020
	* USA/WA-UW209/2020
	* USA/WA-UW21/2020
	* USA/WA-UW210/2020
	* USA/WA-UW211/2020
	* USA/WA-UW212/2020
	* USA/WA-UW213/2020
	* USA/WA-UW214/2020
	* USA/WA-UW215/2020
	* USA/WA-UW216/2020
	* USA/WA-UW217/2020
	* USA/WA-UW218/2020
	* USA/WA-UW219/2020
	* USA/WA-UW22/2020
	* USA/WA-UW220/2020
	* USA/WA-UW221/2020
	* USA/WA-UW222/2020
	* USA/WA-UW223/2020
	* USA/WA-UW224/2020
	* USA/WA-UW225/2020
	* USA/WA-UW226/2020
	* USA/WA-UW227/2020
	* USA/WA-UW228/2020
	* USA/WA-UW229/2020
	* USA/WA-UW23/2020
	* USA/WA-UW230/2020
	* USA/WA-UW231/2020
	* USA/WA-UW232/2020
	* USA/WA-UW233/2020
	* USA/WA-UW24/2020
	* USA/WA-UW25/2020
	* USA/WA-UW26/2020
	* USA/WA-UW27/2020
	* USA/WA-UW28/2020
	* USA/WA-UW29/2020
	* USA/WA-UW30/2020
	* USA/WA-UW31/2020
	* USA/WA-UW32/2020
	* USA/WA-UW33/2020
	* USA/WA-UW34/2020
	* USA/WA-UW35/2020
	* USA/WA-UW36/2020
	* USA/WA-UW37/2020
	* USA/WA-UW38/2020
	* USA/WA-UW39/2020
	* USA/WA-UW40/2020
	* USA/WA-UW41/2020
	* USA/WA-UW42/2020
	* USA/WA-UW43/2020
	* USA/WA-UW44/2020
	* USA/WA-UW45/2020
	* USA/WA-UW46/2020
	* USA/WA-UW47/2020
	* USA/WA-UW48/2020
	* USA/WA-UW49/2020
	* USA/WA-UW50/2020
	* USA/WA-UW51/2020
	* USA/WA-UW52/2020
	* USA/WA-UW53/2020
	* USA/WA-UW54/2020
	* USA/WA-UW55/2020
	* USA/WA-UW56/2020
	* USA/WA-UW57/2020
	* USA/WA-UW58/2020
	* USA/WA-UW59/2020
	* USA/WA-UW60/2020
	* USA/WA-UW61/2020
	* USA/WA-UW62/2020
	* USA/WA-UW63/2020
	* USA/WA-UW64/2020
	* USA/WA-UW65/2020
	* USA/WA-UW66/2020
	* USA/WA-UW67/2020
	* USA/WA-UW68/2020
	* USA/WA-UW69/2020
	* USA/WA-UW70/2020
	* USA/WA-UW71/2020
	* USA/WA-UW72/2020
	* USA/WA-UW73/2020
	* USA/WA-UW74/2020
	* USA/WA-UW75/2020
	* USA/WA-UW76/2020
	* USA/WA-UW77/2020
	* USA/WA-UW78/2020
	* USA/WA-UW79/2020
	* USA/WA-UW80/2020
	* USA/WA-UW81/2020
	* USA/WA-UW82/2020
	* USA/WA-UW83/2020
	* USA/WA-UW84/2020
	* USA/WA-UW85/2020
	* USA/WA-UW86/2020
	* USA/WA-UW87/2020
	* USA/WA-UW88/2020
	* USA/WA-UW89/2020
	* USA/WA-UW90/2020
	* USA/WA-UW91/2020
	* USA/WA-UW92/2020
	* USA/WA-UW93/2020
	* USA/WA-UW94/2020
	* USA/WA-UW95/2020
	* USA/WA-UW96/2020
	* USA/WA-UW97/2020
	* USA/WA-UW98/2020
	* USA/WA-UW99/2020
	* USA/WA11-UW7/2020
	* USA/WA12-UW8/2020
	* USA/WA13-UW9/2020
	* USA/WA14-UW10/2020
	* USA/WA15-UW11/2020
	* USA/WA16-UW12/2020
	* USA/WA17-UW13/2020
	* USA/WA18-UW14/2020

* Union Hospital of Tongji Medical College, Huazhong University of Science and Technology
	* Wuhan/HBCDC-HB-03/2020
	* Wuhan/HBCDC-HB-04/2020

* University of Wisconsin-Madison AIDS Vaccine Research Laboratories
	* USA/WI-03/2020
	* USA/WI-05/2020
	* USA/WI-06/2020
	* USA/WI-07/2020
	* USA/WI-08/2020
	* USA/WI-09/2020
	* USA/WI-10/2020
	* USA/WI4/2020

* University of Wisconsin-Madison AIDS Vaccine Research Laboratory
	* USA/WI-02/2020

* Unknown
	* France/BFC2094/2020
	* Netherlands/Coevorden_1363618/2020

* Utah Public Health Laboratory
	* USA/UPHL-01/2020
	* USA/UPHL-03/2020
	* USA/UPHL-04/2020
	* USA/UPHL-05/2020
	* USA/UPHL-06/2020
	* USA/UT-00008/2020
	* USA/UT-00009/2020
	* USA/UT-00020/2020

* Valley Medical Center
	* USA/WA8-UW5/2020

* Victorian Infectious Diseases Reference Laboratory (VIDRL)
	* Australia/VIC02/2020
	* Australia/VIC03/2020
	* Australia/VIC04/2020
	* Australia/VIC05/2020
	* Australia/VIC06/2020
	* Australia/VIC07/2020
	* Australia/VIC08/2020
	* Australia/VIC09/2020
	* Australia/VIC10/2020
	* Australia/VIC11/2020
	* Australia/VIC12/2020

* Viral Respiratory Lab, National Institute for Biomedical Research (INRB)
	* Congo/KN-0017/2020
	* Congo/KN-0038/2020
	* Congo/KN-0043/2020
	* Congo/KN-0051/2020
	* Congo/KN-0054/2020
	* Congo/KN-0058/2020
	* Congo/KN-0059/2020
	* Congo/KN-0060/2020
	* Congo/KN-0070/2020
	* Congo/KN-0072/2020
	* Congo/KN-13/2020

* ViroGenetics - BSL3 Laboratory of Virology; Human Genome Variation Research Group & Genomics Centre MCB; Bioinformatics Research Group  Department of Virology
	* Poland/PL_P1/2020

* Virological Research Group, Szentagothai Research Centre
	* Hungary/49/2020

* Virological Research Group, Szentagothai Research Centre, University of Pecs
	* Hungary/mbl1/2020

* Virology Department, Royal Infirmary of Edinburgh, NHS Lothian
	* Scotland/EDB003/2020
	* Scotland/EDB004/2020
	* Scotland/EDB005/2020
	* Scotland/EDB006/2020
	* Scotland/EDB007/2020
	* Scotland/EDB008/2020
	* Scotland/EDB009/2020
	* Scotland/EDB011/2020
	* Scotland/EDB012/2020
	* Scotland/EDB013/2020

* Virology Department, Sheffield Teaching Hospitals NHS Foundation Trust
	* England/SHEF-BFCB1/2020
	* England/SHEF-BFCC0/2020
	* England/SHEF-BFCDF/2020
	* England/SHEF-BFCEE/2020
	* England/SHEF-BFCFD/2020
	* England/SHEF-BFD09/2020
	* England/SHEF-BFD18/2020
	* England/SHEF-BFD27/2020
	* England/SHEF-BFD36/2020
	* England/SHEF-BFD45/2020
	* England/SHEF-BFD54/2020
	* England/Sheff01/2020
	* England/Sheff02/2020

* Virology Unit, Institut Pasteur du Cambodge.
	* Cambodia/0012/2020

* Virology laboratory Ministry of Health Kuwait sequenced at Dasman Diabetes Institute
	* Kuwait/KU12/2020

* WA State Department of Health
	* USA/WA1-A12/2020

* WHO National Influenza Centre Russian Federation
	* Russia/StPetersburg-3524/2020

* Wales Specialist Virology Centre
	* Wales/PHW03/2020
	* Wales/PHW04/2020
	* Wales/PHW05/2020
	* Wales/PHW06/2020
	* Wales/PHW07/2020
	* Wales/PHW09/2020
	* Wales/PHW1/2020
	* Wales/PHW10/2020
	* Wales/PHW12/2020
	* Wales/PHW13/2020
	* Wales/PHW17/2020
	* Wales/PHW18/2020
	* Wales/PHW2/2020
	* Wales/PHW21/2020
	* Wales/PHW25/2020
	* Wales/PHW26/2020
	* Wales/PHW27/2020
	* Wales/PHW28/2020
	* Wales/PHW29/2020
	* Wales/PHW32/2020
	* Wales/PHW33/2020
	* Wales/PHW35/2020
	* Wales/PHW37/2020
	* Wales/PHW38/2020

* Washington State Department of Health
	* USA/WA-S100/2020
	* USA/WA-S101/2020
	* USA/WA-S102/2020
	* USA/WA-S103/2020
	* USA/WA-S104/2020
	* USA/WA-S105/2020
	* USA/WA-S106/2020
	* USA/WA-S107/2020
	* USA/WA-S108/2020
	* USA/WA-S109/2020
	* USA/WA-S113/2020
	* USA/WA-S114/2020
	* USA/WA-S115/2020
	* USA/WA-S116/2020
	* USA/WA-S117/2020
	* USA/WA-S118/2020
	* USA/WA-S119/2020
	* USA/WA-S12/2020
	* USA/WA-S120/2020
	* USA/WA-S121/2020
	* USA/WA-S122/2020
	* USA/WA-S13/2020
	* USA/WA-S14/2020
	* USA/WA-S15/2020
	* USA/WA-S16/2020
	* USA/WA-S17/2020
	* USA/WA-S18/2020
	* USA/WA-S19/2020
	* USA/WA-S20/2020
	* USA/WA-S21/2020
	* USA/WA-S22/2020
	* USA/WA-S23/2020
	* USA/WA-S24/2020
	* USA/WA-S25/2020
	* USA/WA-S26/2020
	* USA/WA-S27/2020
	* USA/WA-S28/2020
	* USA/WA-S29/2020
	* USA/WA-S30/2020
	* USA/WA-S31/2020
	* USA/WA-S32/2020
	* USA/WA-S33/2020
	* USA/WA-S34/2020
	* USA/WA-S35/2020
	* USA/WA-S36/2020
	* USA/WA-S37/2020
	* USA/WA-S38/2020
	* USA/WA-S39/2020
	* USA/WA-S40/2020
	* USA/WA-S41/2020
	* USA/WA-S42/2020
	* USA/WA-S43/2020
	* USA/WA-S44/2020
	* USA/WA-S45/2020
	* USA/WA-S46/2020
	* USA/WA-S47/2020
	* USA/WA-S48/2020
	* USA/WA-S49/2020
	* USA/WA-S50/2020
	* USA/WA-S51/2020
	* USA/WA-S52/2020
	* USA/WA-S53/2020
	* USA/WA-S54/2020
	* USA/WA-S55/2020
	* USA/WA-S56/2020
	* USA/WA-S57/2020
	* USA/WA-S58/2020
	* USA/WA-S59/2020
	* USA/WA-S60/2020
	* USA/WA-S61/2020
	* USA/WA-S62/2020
	* USA/WA-S63/2020
	* USA/WA-S64/2020
	* USA/WA-S65/2020
	* USA/WA-S66/2020
	* USA/WA-S67/2020
	* USA/WA-S68/2020
	* USA/WA-S69/2020
	* USA/WA-S70/2020
	* USA/WA-S71/2020
	* USA/WA-S72/2020
	* USA/WA-S73/2020
	* USA/WA-S74/2020
	* USA/WA-S75/2020
	* USA/WA-S76/2020
	* USA/WA-S77/2020
	* USA/WA-S78/2020
	* USA/WA-S79/2020
	* USA/WA-S80/2020
	* USA/WA-S81/2020
	* USA/WA-S82/2020
	* USA/WA-S83/2020
	* USA/WA-S84/2020
	* USA/WA-S85/2020
	* USA/WA-S86/2020
	* USA/WA-S87/2020
	* USA/WA-S88/2020
	* USA/WA-S89/2020
	* USA/WA-S90/2020
	* USA/WA-S91/2020
	* USA/WA-S92/2020
	* USA/WA-S93/2020
	* USA/WA-S94/2020
	* USA/WA-S95/2020
	* USA/WA-S96/2020
	* USA/WA-S97/2020
	* USA/WA-S98/2020
	* USA/WA-S99/2020
	* USA/WA1-F6/2020
	* USA/WA2/2020

* Washington State Public Health Lab
	* USA/WA4-UW2/2020
	* USA/WA6-UW3/2020
	* USA/WA7-UW4/2020

* Weifang Center for Disease Control and Prevention
	* China/WF0001/2020
	* China/WF0002/2020
	* China/WF0003/2020
	* China/WF0004/2020
	* China/WF0006/2020
	* China/WF0009/2020
	* China/WF0012/2020
	* China/WF0014/2020
	* China/WF0015/2020
	* China/WF0016/2020
	* China/WF0017/2020
	* China/WF0018/2020
	* China/WF0019/2020
	* China/WF0020/2020
	* China/WF0021/2020
	* China/WF0023/2020
	* China/WF0024/2020
	* China/WF0026/2020
	* China/WF0028/2020
	* China/WF0029/2020

* Wellington Hospital
	* NewZealand/20VR0275/2020
	* NewZealand/20VR0276/2020

* West of Scotland Specialist Virology Centre, NHSGGC
	* Scotland/CVR01/2020
	* Scotland/CVR02/2020
	* Scotland/CVR03/2020
	* Scotland/CVR04/2020
	* Scotland/CVR05/2020
	* Scotland/CVR06/2020
	* Scotland/CVR07/2020
	* Scotland/CVR10/2020

* Wisconsin Department of Health Services
	* USA/WI1/2020

* Wuhan Fourth Hospital
	* Wuhan/WH05/2020

* Wuhan Institute of Virology, Chinese Academy of Sciences
	* bat/Yunnan/RaTG13/2013

* Wuhan Jinyintan Hospital
	* Wuhan/HBCDC-HB-01/2019
	* Wuhan/HBCDC-HB-02/2019
	* Wuhan/HBCDC-HB-03/2019
	* Wuhan/HBCDC-HB-04/2019
	* Wuhan/WIV02/2019
	* Wuhan/WIV04/2019
	* Wuhan/WIV05/2019
	* Wuhan/WIV06/2019
	* Wuhan/WIV07/2019

* Wuhan Lung Hospital
	* Wuhan/HBCDC-HB-06/2020

* Yale Clinical Virology Laboratory
	* USA/CT-Yale-006/2020
	* USA/CT-Yale-007/2020
	* USA/CT-Yale-008/2020
	* USA/CT-Yale-009/2020
	* USA/CT-Yale-010/2020

* Yongchuan District Center for Disease Control and Prevention
	* Chongqing/YC01/2020

* Zhejiang Provincial Center for Disease Control and Prevention
	* Zhejiang/WZ-01/2020
	* Zhejiang/WZ-02/2020

* Zhongxian Center for Disease Control and Prevention
	* Chongqing/ZX01/2020