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Rework nf-test

Rework nf-test #727

Triggered via pull request March 27, 2024 16:19
Status Cancelled
Total duration 2m 10s
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ci.yml

on: pull_request
Matrix: test_all
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45 errors and 17 warnings
Run nf-test with vcf_extract_relate_somalier-latest-everything
Canceling since a higher priority waiting request for 'nf-core CI-169' exists
Run nf-test with vcf_validate_small_variants-latest-everything
Canceling since a higher priority waiting request for 'nf-core CI-169' exists
Run nf-test with vcf_upd_updio-latest-everything
Canceling since a higher priority waiting request for 'nf-core CI-169' exists
Run nf-test with vcf_ped_rtgtools-latest-everything
Canceling since a higher priority waiting request for 'nf-core CI-169' exists
Run nf-test with pipeline_gvcfs-latest-everything
Canceling since a higher priority waiting request for 'nf-core CI-169' exists
Run nf-test with pipeline_variations2-latest-everything
Canceling since a higher priority waiting request for 'nf-core CI-169' exists
Run nf-test with vcf_annotation-latest-everything
Canceling since a higher priority waiting request for 'nf-core CI-169' exists
Run nf-test with pipeline_default-latest-everything
Canceling since a higher priority waiting request for 'nf-core CI-169' exists
Run nf-test with pipeline_callers-latest-everything
Canceling since a higher priority waiting request for 'nf-core CI-169' exists
Run nf-test with input_split_bedtools-latest-everything
Canceling since a higher priority waiting request for 'nf-core CI-169' exists
Run nf-test with pipeline_variations-latest-everything
Canceling since a higher priority waiting request for 'nf-core CI-169' exists
Run nf-test with vcf_upd_updio-23.04.0
Canceling since a higher priority waiting request for 'nf-core CI-169' exists
Run nf-test with vcf_upd_updio-23.04.0
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
Run nf-test with cram_call_genotype_gatk4-latest-everything
Canceling since a higher priority waiting request for 'nf-core CI-169' exists
Run nf-test with cram_call_genotype_gatk4-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
Run nf-test with vcf_validate_small_variants-23.04.0
Canceling since a higher priority waiting request for 'nf-core CI-169' exists
Run nf-test with vcf_validate_small_variants-23.04.0
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
Run nf-test with cram_prepare_samtools_bedtools-latest-everything
Canceling since a higher priority waiting request for 'nf-core CI-169' exists
Run nf-test with cram_prepare_samtools_bedtools-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
Run nf-test with cram_call_genotype_gatk4-23.04.0
Canceling since a higher priority waiting request for 'nf-core CI-169' exists
Run nf-test with cram_call_genotype_gatk4-23.04.0
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
Run nf-test with input_split_bedtools-23.04.0
Canceling since a higher priority waiting request for 'nf-core CI-169' exists
Run nf-test with input_split_bedtools-23.04.0
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
Run nf-test with pipeline_variations-23.04.0
Canceling since a higher priority waiting request for 'nf-core CI-169' exists
Run nf-test with pipeline_variations-23.04.0
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
Run nf-test with cram_call_vardictjava-latest-everything
Canceling since a higher priority waiting request for 'nf-core CI-169' exists
Run nf-test with cram_call_vardictjava-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
Run nf-test with vcf_ped_rtgtools-23.04.0
Canceling since a higher priority waiting request for 'nf-core CI-169' exists
Run nf-test with vcf_ped_rtgtools-23.04.0
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
Run nf-test with cram_call_vardictjava-23.04.0
Canceling since a higher priority waiting request for 'nf-core CI-169' exists
Run nf-test with cram_call_vardictjava-23.04.0
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
Run nf-test with pipeline_gvcfs-23.04.0
Canceling since a higher priority waiting request for 'nf-core CI-169' exists
Run nf-test with pipeline_gvcfs-23.04.0
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
Run nf-test with pipeline_callers-23.04.0
Canceling since a higher priority waiting request for 'nf-core CI-169' exists
Run nf-test with pipeline_callers-23.04.0
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
Run nf-test with vcf_annotation-23.04.0
Canceling since a higher priority waiting request for 'nf-core CI-169' exists
Run nf-test with vcf_annotation-23.04.0
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
Run nf-test with pipeline_default-23.04.0
Canceling since a higher priority waiting request for 'nf-core CI-169' exists
Run nf-test with pipeline_default-23.04.0
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
Run nf-test with cram_prepare_samtools_bedtools-23.04.0
Canceling since a higher priority waiting request for 'nf-core CI-169' exists
Run nf-test with cram_prepare_samtools_bedtools-23.04.0
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
Run nf-test with pipeline_variations2-23.04.0
Canceling since a higher priority waiting request for 'nf-core CI-169' exists
Run nf-test with pipeline_variations2-23.04.0
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
Run nf-test with vcf_extract_relate_somalier-23.04.0
Canceling since a higher priority waiting request for 'nf-core CI-169' exists
Run nf-test with vcf_extract_relate_somalier-23.04.0
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
Run nf-test with vcf_upd_updio-23.04.0
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
Run nf-test with cram_call_genotype_gatk4-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
Run nf-test with vcf_validate_small_variants-23.04.0
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
Run nf-test with cram_prepare_samtools_bedtools-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
Run nf-test with cram_call_genotype_gatk4-23.04.0
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
Run nf-test with input_split_bedtools-23.04.0
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
Run nf-test with pipeline_variations-23.04.0
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
Run nf-test with cram_call_vardictjava-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
Run nf-test with vcf_ped_rtgtools-23.04.0
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
Run nf-test with cram_call_vardictjava-23.04.0
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
Run nf-test with pipeline_gvcfs-23.04.0
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
Run nf-test with pipeline_callers-23.04.0
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
Run nf-test with vcf_annotation-23.04.0
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
Run nf-test with pipeline_default-23.04.0
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
Run nf-test with cram_prepare_samtools_bedtools-23.04.0
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
Run nf-test with pipeline_variations2-23.04.0
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
Run nf-test with vcf_extract_relate_somalier-23.04.0
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23