Code

Some additional filter improvements#158

Code

Merged

nvnieuwk merged 6 commits intodevnf-cmgg/germline:devfrom filter-improvementsnf-cmgg/germline:filter-improvementsCopy head branch name to clipboardDec 19, 2023

+37-47

Commits

Commits on Dec 14, 2023

• add --only_pass

  nvnieuwk

  committed
  cb1d306

  Copy full SHA for cb1d306

• set scatter_count as non-required

  nvnieuwk

  committed
  1c3e167

  Copy full SHA for 1c3e167

• add keep_alts and remove reheadering for vardict

  nvnieuwk

  committed
  2578b1e

  Copy full SHA for 2578b1e

• fix fails test

  nvnieuwk

  committed
  ee3fad9

  Copy full SHA for ee3fad9

• update hypercap profile

  nvnieuwk

  committed
  15bc619

  Copy full SHA for 15bc619

Commits on Dec 18, 2023

• rename keep_alts to keep_alt_contigs

  nvnieuwk

  committed
  5eadff3

  Copy full SHA for 5eadff3