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doc: 25.1.0 release notes
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25.1.0 (May 19, 2025)
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=====================
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New feature release in the 25.1.x series.
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This release includes a small fix related to interpolations on the bounds
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of the image field-of-view. This improves consistency with prior versions
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of fMRIPrep for data with limited fields-of-view or small bounding boxes.
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This release also adds support for providing fallback values for
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``TotalReadoutTime`` metadata.
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For Philips datasets, if ``EstimatedTotalReadoutTime`` or
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``EstimatedEffectiveEchoSpacing`` are available, you can use these
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by passing ``--fallback-total-readout-time estimated``.
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For datasets with no readout time information, a numeric value can be passed,
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for example, ``--fallback-total-readout-time 0.05``.
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If the readout time information is known, it is preferable to encode directly
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in the dataset, but there are cases where it is better to explicitly pass the
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value to the software than inject uncertain metadata into the dataset.
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In particular, the true readout time is not necessary for SyN-SDC, but a value
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is nonetheless needed in order to estimate the inhomogeneity field.
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This release is a long-term-support *candidate*. We will be performing
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extensive tests and monitoring bug reports over the next couple of months
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to determine whether issues can be addressed without making breaking changes.
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Structural processing changes
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-----------------------------
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This release pins a version of sMRIPrep (0.18) that correctly handles precomputed
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tissue probability maps.
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The FAST segmentation also now skips an internal bias field correction step
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that is redundant with ANTs N4 correction,
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and may be inappropriate for non-human populations.
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Fieldmap processing changes
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---------------------------
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This release pins a version of SDCFlows (2.13) that includes several improvements to
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the SyN-SDC method.
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In particular, the fieldmap prior that constrained the scope of displacements
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was reintroduced and refined.
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All merged pull requests
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------------------------
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* FIX: Use nearest mode for extrapolating data outside image boundaries (#3453)
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* ENH: Add flag to fallback to Estimated* metadata or a passed value for TotalReadoutTime (#3423)
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25.0.0 (March 25, 2025)
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=======================
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New feature release in the 25.0.x series.

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