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rename and synonyms#17

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NRayya wants to merge 27 commits intomainnmrML/nmrCV:mainfrom calibrationnmrML/nmrCV:calibrationCopy head branch name to clipboard

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Commits on Feb 21, 2024

• Merge branch 'main' into Import-CHEBI-dependencies

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Commits on Mar 7, 2024

• import NMR solvents

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• Merge branch 'main' into Import-CHEBI-dependencies

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• update CHEBI module using ./run.sh make refresh-chebi

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Commits on Mar 13, 2024

• import NMR references

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Commits on Mar 18, 2024

• Merge pull request #13 from nmrML/defs-references

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• Move chebi:'chemical entity' under bfo:'material entity'

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• Don't make the CHEBI module a base module

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• Refresh CHEBI import module

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• Merge branch 'main' into Import-CHEBI-dependencies

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• Merge branch 'main' into Import-CHEBI-dependencies

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• Ignore IAO, CHMO, OBI & PATO for now

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• Ignore IAO, CHMO, OBI & PATO for now (pt.2)

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• Make CHEBI:role equivalent with BFO:role

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• Move NMR buffer and aquisition nucleus under BFO:material entity

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• Add equivalence axiom to NMR solvent

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• Materialize inferred SubClassOf axioms using ROBOT reason:

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Commits on Mar 19, 2024

• Obsolete Chloroform-d in favor of imported CHEBI equivalent

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• Obsolete Hexafluorobenzene in favour of imported CHEBI equivalent

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• Obsolete heavy water in favor of imported CHEBI equivalent

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• Add textual definition to NMR solvent

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• Infer CHEBI_38589 (hexafluorobenzene) to be an NMR solvent

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• Move NMR:1400032> "calibration compound" under molecular entity

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• Add logical definition to NMR:1400033 "chemical shift standard"

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• Add general class axiom to define subclasses of 'chemical shift standard'

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• Infer subclassOf 'chemical shift standard' axioms for those CHEBI molecular entities which bear a CHEBI:'NMR chemical shift reference compound' role using:

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Commits on Mar 20, 2024

• rename calibration compound and remove synonyms

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