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Urgent help: Error - Installation - config system not detected. Please (re) install HiC-Pro ! #670

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lscnsdad opened this issue Feb 14, 2025 · 0 comments

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@lscnsdad
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Here are my installation step, I hope to get your help.
1、Download and unzip the installation package

wget -c http://github.com/nservant/HiC-Pro/archive/refs/tags/v3.1.0.tar.gz
tar -zxvf [v3.1.0.tar.gz](http://github.com/nservant/HiC-Pro/archive/refs/tags/v3.1.0.tar.gz)

2、Create a virtual environment

conda env create -f ~/lxc_data/HiC-Pro-3.1.0/environment.yml -n nehic
  1. Go to the HiC-Pro-3.1.0 configuration config-install.txt
vi config-install.txt
mkdir hicpro
mkdir bin

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4、Run the Make Cofigure command

error:

make -f ./scripts/install/Makefile CONFIG_SYS=./config-install.txt
make[1]: Entering directory '/spider_data/lxc/HiC-Pro-3.1.0'
./scripts/install/install_dependencies.sh -c ./config-install.txt -p /home/lxc/lxc_data/HiC-Pro-3.1.0/bin -o /home/lxc/lxc_data/HiC-Pro-3.1.0/bin/HiC-Pro_3.1.0 -q
make[1]: ./scripts/install/install_dependencies.sh: Permission denied
make[1]: *** [scripts/install/Makefile:41: configure] Error 127
make[1]: Leaving directory '/spider_data/lxc/HiC-Pro-3.1.0'
make: *** [Makefile:40: configure] Error 2

Then change to the following, is there something wrong here?

bash ./scripts/install/install_dependencies.sh -c ./config-install.txt -p /home/lxc/lxc_data/hicpro/bin -o /home/lxc/lxc_data/hicpro/bin/HiC-Pro_3.1.0 -q

5、Check out config-system.txt

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6、Run the make command

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7、Configure environment variables

vi ~/.bashrc

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8、Installation error

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