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Replace "dot definitions" for some insect-related terms. #3128

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Nov 27, 2023
Merged

Replace "dot definitions" for some insect-related terms. #3128

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bf7bfc0
Replace "dot definitions" for some insect-related terms.
gouttegd Nov 27, 2023
50e5ac6
Merge branch 'fix-dot-definition' into replace-dot-definitions-for-fl…
anitacaron Nov 27, 2023
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17 changes: 13 additions & 4 deletions src/ontology/uberon-edit.obo
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Original file line number Diff line number Diff line change
Expand Up @@ -219072,6 +219072,7 @@ relationship: part_of UBERON:6000171 ! insect embryonic abdomen
[Term]
id: UBERON:6000186
name: insect embryonic optic lobe primordium
def: "Primordium of the insect embryo that gives rises to the embryonic/larval optic anlage." [ISBN:9783540570790]
synonym: "optic lobe placode" RELATED []
synonym: "optic lobe primordium" RELATED []
is_a: UBERON:0001048 ! primordium
Expand Down Expand Up @@ -219618,7 +219619,7 @@ consider: UBERON:6001790
[Term]
id: UBERON:6001842
name: insect embryonic/larval digestive system
def: "." [FlyBase:FBrf0007733, FlyBase:FBrf0064792]
def: "Digestive system of the insect embryo or larva." [ISBN:9780879698287, ISBN:9780879698997]
synonym: "larval digestive system" EXACT []
is_a: UBERON:0001007 ! digestive system
relationship: only_in_taxon NCBITaxon:50557 ! Insecta
Expand Down Expand Up @@ -219862,7 +219863,7 @@ relationship: part_of UBERON:6003218 ! insect adult muscle system
[Term]
id: UBERON:6003559
name: insect adult nervous system
def: "." [FlyBase:FBrf0002482, FlyBase:FBrf0007196, FlyBase:FBrf0007735, FlyBase:FBrf0034076]
def: "Nervous system of the adult insect." [ISBN:978-087969828-7]
is_a: UBERON:0001016 ! nervous system
relationship: only_in_taxon NCBITaxon:50557 ! Insecta
relationship: part_of UBERON:0007023 ! adult organism
Expand Down Expand Up @@ -220010,7 +220011,7 @@ relationship: part_of UBERON:6004520 ! insect mouthpart
[Term]
id: UBERON:6004551
name: insect adult external thorax
def: "." [FlyBase:FBrf0006943]
def: "External structures that make up the adult insect thorax." [ISBN:9780879698287]
is_a: UBERON:6007289 ! insect tagmatic subdivision of integument
relationship: part_of UBERON:6003018 ! insect adult thorax
relationship: part_of UBERON:6005396 ! insect adult integumentary system
Expand Down Expand Up @@ -220321,6 +220322,7 @@ relationship: only_in_taxon NCBITaxon:50557 ! Insecta
[Term]
id: UBERON:6005467
name: insect lymph gland primordium
def: "Primordium of the insect embryo that gives rise to the embryonic/larval lymph gland." [ISBN:9783540570790]
synonym: "lymph gland specific anlage" RELATED []
is_a: UBERON:0002050 ! embryonic structure
is_a: UBERON:6005461 ! insect circulatory system primordium
Expand Down Expand Up @@ -220383,7 +220385,7 @@ relationship: part_of UBERON:0000922 ! embryo
[Term]
id: UBERON:6005558
name: insect ventral ectoderm
def: "." [FlyBase:FBrf0089570]
def: "Ventral part of the insect trunk ectoderm." [ISBN:9783540570790]
synonym: "P2 VenEc" RELATED [FBC:DOS]
synonym: "venEc" RELATED []
is_a: UBERON:0005423 ! developing anatomical structure
Expand Down Expand Up @@ -220417,6 +220419,7 @@ relationship: part_of UBERON:6001731 ! insect larval ocular segment
[Term]
id: UBERON:6005830
name: insect Bolwig organ primordium
def: "Primordium of the insect embryo that gives rise to the larval Bolwig organ." [ISBN:9783540570790]
synonym: "Bolwig's organ primordium" EXACT []
synonym: "P1 BolOrg" RELATED [FBC:DOS]
is_a: UBERON:0001048 ! primordium
Expand Down Expand Up @@ -220644,6 +220647,7 @@ consider: FBbt:00007435
[Term]
id: UBERON:6016022
name: insect abdominal histoblast primordium
def: "A primordium of the insect embryo that gives rise to the larval abdominal histoblast nests." [ISBN:9780879698997]
synonym: "abdominal histoblast specific anlage" RELATED []
is_a: UBERON:0001048 ! primordium
is_a: UBERON:0002050 ! embryonic structure
Expand All @@ -220654,6 +220658,7 @@ relationship: part_of UBERON:0000922 ! embryo
[Term]
id: UBERON:6017021
name: insect abdominal histoblast anlage
def: "A population of cells of the insect epidermis primordium that give rises to the abdominal histoblast primordium." [ISBN:9780879698997]
is_a: UBERON:0002050 ! embryonic structure
is_a: UBERON:0007688 ! anlage
relationship: dc-contributor https://orcid.org/0000-0001-9676-7393
Expand All @@ -220663,20 +220668,23 @@ relationship: part_of UBERON:0000922 ! embryo
[Term]
id: UBERON:6025991
name: insect anterior ectoderm derivative
def: "An insect embryonic structure that develops from the anterior ectoderm." [ISBN:9783540570790]
is_a: UBERON:0004121 ! ectoderm-derived structure
relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 ! David Osumi-Sutherland
relationship: develops_from UBERON:6000119 ! insect anterior ectoderm

[Term]
id: UBERON:6025993
name: insect ventral ectoderm derivative
def: "An insect embryonic structure that develops from the ventral ectoderm." [ISBN:9783540570790]
is_a: UBERON:0004121 ! ectoderm-derived structure
relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 ! David Osumi-Sutherland
relationship: develops_from UBERON:6005558 ! insect ventral ectoderm

[Term]
id: UBERON:6026000
name: insect trunk mesoderm derivative
def: "An insect embryonic structure that develops from the trunk mesoderm." [ISBN:9783540570790]
is_a: UBERON:0004120 ! mesoderm-derived structure
relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 ! David Osumi-Sutherland
relationship: develops_from UBERON:6000128 ! insect trunk mesoderm
Expand All @@ -220685,6 +220693,7 @@ relationship: in_taxon NCBITaxon:6656 {source="https://github.com/obophenotype/u
[Term]
id: UBERON:6026002
name: insect visceral mesoderm derivative
def: "An insect embryonic structure that develops from the visceral mesoderm." [ISBN:9783540570790]
is_a: UBERON:6026000 ! insect trunk mesoderm derivative
relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 ! David Osumi-Sutherland
relationship: develops_from UBERON:6000130 ! insect visceral mesoderm
Expand Down