Apply ruff format to Python code

[DimitriPapadopoulos]

No description provided.

[sbesson]

Thanks for the contribution. However after discussion with the @ome/formats team, the general consensus is in addition to being a significant cost in terms of reviewing this PR which modifies thousands of lines of code, the value of enforcing a Python formatting style is not worth it at this stage.

[DimitriPapadopoulos]

I understand. The idea was to not to review the PR. Instead, a maintainer could have rerun ruff format locally and verified that the generated Java code is identical. While not all ruff check fixes are safe, ruff format is supposed to be totally safe - it merely reformats code (spaces, line breaks, etc.) without any substantial modification.