Skip to content
Push ext-tools for develop branches

cicd: Do not fail on missing dependencies. #TASK-7809 #150

Sign in to view logs

cicd: Do not fail on missing dependencies. #TASK-7809

cicd: Do not fail on missing dependencies. #TASK-7809 #150

GitHub Actions / Surefire tests report emr6.1 all runShortTests failed Nov 3, 2025 in 0s

288 tests run, 11 skipped, 1 failed.

Annotations

Check failure on line 38 in opencga-catalog/src/test/java/org/opencb/opencga/templates/TemplateEntryIteratorTest.java

See this annotation in the file changed.

@github-actions github-actions / Surefire tests report emr6.1 all runShortTests

TemplateEntryIteratorTest.testSampleIterator 

Unsupported type 'org.apache.avro.specific.SpecificData'
Raw output 
java.lang.IllegalArgumentException: Unsupported type 'org.apache.avro.specific.SpecificData'
	at org.opencb.opencga.catalog.templates.TemplateEntryIterator.getType(TemplateEntryIterator.java:474)
	at org.opencb.opencga.catalog.templates.TemplateEntryIterator.getType(TemplateEntryIterator.java:441)
	at org.opencb.opencga.catalog.templates.TemplateEntryIterator.getDeclaredFields(TemplateEntryIterator.java:418)
	at org.opencb.opencga.catalog.templates.TemplateEntryIterator.getDeclaredFields(TemplateEntryIterator.java:398)
	at org.opencb.opencga.catalog.templates.TemplateEntryIterator.getDeclaredFields(TemplateEntryIterator.java:411)
	at org.opencb.opencga.catalog.templates.TemplateEntryIterator.getDeclaredFields(TemplateEntryIterator.java:398)
	at org.opencb.opencga.catalog.templates.TemplateEntryIterator.getDeclaredFields(TemplateEntryIterator.java:398)
	at org.opencb.opencga.catalog.templates.TemplateEntryIterator.readNextTxtLine(TemplateEntryIterator.java:158)
	at org.opencb.opencga.catalog.templates.TemplateEntryIterator.processNext(TemplateEntryIterator.java:126)
	at org.opencb.opencga.catalog.templates.TemplateEntryIterator.hasNext(TemplateEntryIterator.java:81)
	at org.opencb.opencga.templates.TemplateEntryIteratorTest.testSampleIterator(TemplateEntryIteratorTest.java:38)
	at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
	at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
	at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
	at java.lang.reflect.Method.invoke(Method.java:498)
	at org.junit.runners.model.FrameworkMethod$1.runReflectiveCall(FrameworkMethod.java:59)
	at org.junit.internal.runners.model.ReflectiveCallable.run(ReflectiveCallable.java:12)
	at org.junit.runners.model.FrameworkMethod.invokeExplosively(FrameworkMethod.java:56)
	at org.junit.internal.runners.statements.InvokeMethod.evaluate(InvokeMethod.java:17)
	at org.junit.runners.ParentRunner$3.evaluate(ParentRunner.java:306)
	at org.junit.runners.BlockJUnit4ClassRunner$1.evaluate(BlockJUnit4ClassRunner.java:100)
	at org.junit.runners.ParentRunner.runLeaf(ParentRunner.java:366)
	at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:103)
	at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:63)
	at org.junit.runners.ParentRunner$4.run(ParentRunner.java:331)
	at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:79)
	at org.junit.runners.ParentRunner.runChildren(ParentRunner.java:329)
	at org.junit.runners.ParentRunner.access$100(ParentRunner.java:66)
	at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:293)
	at org.junit.runners.ParentRunner$3.evaluate(ParentRunner.java:306)
	at org.junit.runners.ParentRunner.run(ParentRunner.java:413)
	at org.junit.runners.Suite.runChild(Suite.java:128)
	at org.junit.runners.Suite.runChild(Suite.java:27)
	at org.junit.runners.ParentRunner$4.run(ParentRunner.java:331)
	at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:79)
	at org.junit.runners.ParentRunner.runChildren(ParentRunner.java:329)
	at org.junit.runners.ParentRunner.access$100(ParentRunner.java:66)
	at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:293)
	at org.junit.runners.ParentRunner$3.evaluate(ParentRunner.java:306)
	at org.junit.runners.ParentRunner.run(ParentRunner.java:413)
	at org.apache.maven.surefire.junitcore.JUnitCore.run(JUnitCore.java:49)
	at org.apache.maven.surefire.junitcore.JUnitCoreWrapper.createRequestAndRun(JUnitCoreWrapper.java:120)
	at org.apache.maven.surefire.junitcore.JUnitCoreWrapper.executeLazy(JUnitCoreWrapper.java:105)
	at org.apache.maven.surefire.junitcore.JUnitCoreWrapper.execute(JUnitCoreWrapper.java:77)
	at org.apache.maven.surefire.junitcore.JUnitCoreWrapper.execute(JUnitCoreWrapper.java:69)
	at org.apache.maven.surefire.junitcore.JUnitCoreProvider.invoke(JUnitCoreProvider.java:146)
	at org.apache.maven.surefire.booter.ForkedBooter.runSuitesInProcess(ForkedBooter.java:385)
	at org.apache.maven.surefire.booter.ForkedBooter.execute(ForkedBooter.java:162)
	at org.apache.maven.surefire.booter.ForkedBooter.run(ForkedBooter.java:507)
	at org.apache.maven.surefire.booter.ForkedBooter.main(ForkedBooter.java:495)
View more details on GitHub Actions