Repositories list

• preprocessing

  Public
  preprocessing tools for multi-modal 3D brain MRI

  mrimulti-modalbrain+ 4normalizationbrain-extractionco-registrationskullstripping

  C

  •

  Apache License 2.0

  •5•18•6•1•Updated Feb 10, 2025Feb 10, 2025

• HD-BET

  Public
  Python

  •

  Apache License 2.0

  •0•1•0•0•Updated Feb 10, 2025Feb 10, 2025

• panoptica

  Public
  panoptica -- instance-wise evaluation of 3D semantic and instance segmentation maps

  semanticmetricsevaluation+ 5segmentationinstance3dpanopticinstance-wise

  Python

  •

  Apache License 2.0

  •4•22•9•1•Updated Feb 4, 2025Feb 4, 2025

• tutorials

  Public
  BrainLes tutotrials

  pipelinesmribrain+ 1pathology

  Jupyter Notebook

  •

  MIT License

  •2•9•4•1•Updated Feb 3, 2025Feb 3, 2025

• pediatric_seg

  Public
  pediatric

  0•0•1•0•Updated Jan 30, 2025Jan 30, 2025

• BraTS

  Public
  Providing top performing algorithms from the Brain Tumor Segmentation (BraTS) challenges.

  Python

  •

  Apache License 2.0

  •2•13•1•0•Updated Jan 14, 2025Jan 14, 2025

• AURORA

  Public
  Segmentation models for cancer metastasis in brain MR

  metastasismrisegmentation

  Python

  •

  Apache License 2.0

  •1•7•0•0•Updated Dec 28, 2024Dec 28, 2024

• deep_quality_estimation

  Public
  Quality estimation for BraTS glioma segmentation models

  mrisegmentationbrain+ 1glioma

  Python

  •0•3•0•0•Updated Nov 27, 2024Nov 27, 2024

• brainles-template

  Public template
  Template for new BrainLes repositories

  0•0•0•0•Updated Nov 6, 2024Nov 6, 2024

• .github

  Public
  Apache License 2.0

  •0•1•0•0•Updated Oct 24, 2024Oct 24, 2024

• auxiliary

  Public
  Python

  •

  Apache License 2.0

  •2•1•1•0•Updated Aug 29, 2024Aug 29, 2024

• eReg

  Public
  TODO

  Python

  •

  Apache License 2.0

  •0•1•5•0•Updated Apr 16, 2024Apr 16, 2024

• BrainLes

  Public
  0•0•0•0•Updated Mar 7, 2024Mar 7, 2024