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    439 repositories

    • cfa-scoring-service

      Public
      Python
      •
      Apache License 2.0
      •0•2•0•1•Updated Feb 28, 2025Feb 28, 2025

    • NEDSS-Modernization

      Public
      Java
      •4•20•0•4•Updated Feb 28, 2025Feb 28, 2025

    • tostadas

      Public
      🧬 💻 TOSTADAS → Toolkit for Open Sequence Triage, Annotation and DAtabase Submission
      pythondockermetadatabioinformaticsrna-seqpipelinenextflowgeneticsazuresequencing
      Python
      •
      Apache License 2.0
      •13•27•16•2•Updated Feb 28, 2025Feb 28, 2025

    • NEDSS-DataReporting

      Public
      Data Near Real Time Reporting micro services for Modernized NBS System
      TSQL
      •
      Apache License 2.0
      •3•0•0•9•Updated Feb 28, 2025Feb 28, 2025

    • cfa-epinow2-pipeline

      Public
      R
      •
      Apache License 2.0
      •6•11•23•4•Updated Feb 28, 2025Feb 28, 2025

    • pyrenew-hew

      Public
      Models and infrastructure for forecasting COVID-19 and Flu hospitalizations using wastewater data with PyRenew
      Python
      •
      Apache License 2.0
      •3•8•65•5•Updated Feb 28, 2025Feb 28, 2025

    • data-exchange-upload

      Public
      The Public Health Data Operations (PHDO) Upload service provides secure ingestion, delivery, and observability of public health files from data senders to CDC program target locations via Application Programming Interfaces (APIs).
      Go
      •
      Apache License 2.0
      •6•9•42•19•Updated Feb 28, 2025Feb 28, 2025

    • data-exchange-processing-status

      Public
      The Public Health Data Observability (PHDO) Processing Status API (PS API) was developed to provide visibility into the status and performance of file uploads. The PS API provides the ability to receive reports about the status of uploads, and to develop custom queries to ask detailed questions about the data being uploaded and processed.
      Kotlin
      •
      Apache License 2.0
      •2•3•0•3•Updated Feb 28, 2025Feb 28, 2025

    • cfa-genomic-lag-effect

      Public
      0•0•0•0•Updated Feb 28, 2025Feb 28, 2025

    • cdc-open-viz

      Public
      CDC OpenViz is a library of React packages for data visualization.
      reactvisualizationdatavisualization-library
      TypeScript
      •
      Apache License 2.0
      •25•40•0•12•Updated Feb 28, 2025Feb 28, 2025

    • reedfrost

      Public
      Python
      •
      Apache License 2.0
      •0•0•1•2•Updated Feb 28, 2025Feb 28, 2025

    • dibbs-query-connector

      Public
      A FHIR client allowing public health agencies to query health care organizations directly or via a TEFCA QHIN
      TypeScript
      •
      Creative Commons Zero v1.0 Universal
      •4•5•32•2•Updated Feb 28, 2025Feb 28, 2025

    • prime-reportstream

      Public
      ReportStream is a public intermediary tool for delivery of data between different parts of the healthcare ecosystem.
      fhirpublic-healthcivic-techhl7
      Kotlin
      •
      Creative Commons Zero v1.0 Universal
      •42•75•1.2k•178•Updated Feb 28, 2025Feb 28, 2025

    • dibbs-ecr-viewer

      Public
      HTML
      •
      Creative Commons Zero v1.0 Universal
      •1•2•85•10•Updated Feb 28, 2025Feb 28, 2025

    • polkapox

      Public
      Python
      •
      Apache License 2.0
      •5•8•12•1•Updated Feb 28, 2025Feb 28, 2025

    • data-exchange-fhir

      Public
      Enterprise Data Exchange (DEX) is a new cloud-native centralized data ingestion, validation, and observation service scoped for common data types (HL7, FHIR, CDA, XML, CSV) sent to the CDC. It helps public health stakeholders who send data to the CDC while reducing the maintenance efforts, complexity, and duplication of ingestion points to CDC.
      C#
      •
      Apache License 2.0
      •5•11•157•0•Updated Feb 28, 2025Feb 28, 2025

    • dibbs-vm

      Public
      HCL
      •
      Creative Commons Zero v1.0 Universal
      •4•0•30•3•Updated Feb 28, 2025Feb 28, 2025

    • NEDSS-NNDSS

      Public
      Java
      •
      Apache License 2.0
      •3•0•0•1•Updated Feb 28, 2025Feb 28, 2025

    • ixa-epi-isolation

      Public
      Rust
      •
      Apache License 2.0
      •2•1•7•4•Updated Feb 28, 2025Feb 28, 2025

    • RecordLinker

      Public
      The RecordLinker is a service that links records from two datasets based on a set of common attributes. The service is designed to be used in a variety of public health contexts, such as linking patient records from different sources or linking records from different public health surveillance systems.
      pythonsqlalchemyfastapi
      Python
      •
      Apache License 2.0
      •2•3•22•2•Updated Feb 28, 2025Feb 28, 2025

    • dibbs-star-wars-ecr-data

      Public
      XSLT
      •
      Apache License 2.0
      •0•2•1•0•Updated Feb 28, 2025Feb 28, 2025

    • prime-simplereport

      Public
      SimpleReport is a fast, free, and easy way for COVID-19 testing facilities to report results to public health departments.
      reactjsterraformgraphqlspring-boot
      Java
      •
      Creative Commons Zero v1.0 Universal
      •62•60•166•12•Updated Feb 28, 2025Feb 28, 2025

    • ixa

      Public
      Rust
      •
      Apache License 2.0
      •2•14•33•7•Updated Feb 28, 2025Feb 28, 2025

    • Rt-without-renewal

      Public
      Julia
      •
      Apache License 2.0
      •7•21•64•5•Updated Feb 28, 2025Feb 28, 2025

    • cfa-ngm-widget

      Public
      Python
      •
      Apache License 2.0
      •2•0•8•0•Updated Feb 28, 2025Feb 28, 2025

    • NEDSS-Helm

      Public
      This repository is created for NEDSS Helm charts.
      Smarty
      •
      Apache License 2.0
      •4•2•0•8•Updated Feb 28, 2025Feb 28, 2025

    • abm-python-wrappers

      Public
      Python
      •
      Apache License 2.0
      •2•0•1•2•Updated Feb 28, 2025Feb 28, 2025

    • cfa_azure

      Public
      pythonazureazure-batchazure-container-registryazure-blob-storage
      Python
      •
      Apache License 2.0
      •5•9•5•2•Updated Feb 28, 2025Feb 28, 2025

    • NEDSS-Infrastructure

      Public
      HCL
      •
      Apache License 2.0
      •2•2•0•0•Updated Feb 28, 2025Feb 28, 2025

    • abc-calibration-tools

      Public
      Python
      •
      Apache License 2.0
      •2•1•7•0•Updated Feb 28, 2025Feb 28, 2025