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    61 repositories

    • data-stager

      Public archive
      A service and web UI for staging data between the DCCN project storage and the Donders Repository
      JavaScript
      •
      MIT License
      •0•0•8•1•Updated Feb 11, 2026Feb 11, 2026

    • quidbbids

      Public
      Quantitative Imaging Derived Biomarkers in BIDS
      bidsbiomarkersqmri
      MATLAB
      •
      GNU General Public License v3.0
      •2•0•2•0•Updated Feb 11, 2026Feb 11, 2026

    • PRESTUS

      Public
      PREprocessing & Simulations for Transcranial Ultrasound Stimulation package
      MATLAB
      •
      GNU General Public License v3.0
      •17•21•12•0•Updated Feb 10, 2026Feb 10, 2026

    • hpc-wiki-v2

      Public
      The HPC wiki written in reStructuredText and hosted on ReadTheDocs
      documentationhpcsphinx
      Python
      •
      Creative Commons Attribution 4.0 International
      •14•6•1•0•Updated Feb 5, 2026Feb 5, 2026

    • bidscoin

      Public
      BIDScoin converts your source-level neuroimaging data to BIDS
      mrshpcdicommripetneuroimagingbidsimagingdata-standardspsychopy
      Python
      •
      GNU General Public License v3.0
      •37•150•11•0•Updated Dec 8, 2025Dec 8, 2025

    • hpc-webhook

      Public
      webhook service to trigger HPC job submission
      hpcwebhooksbatchqsub
      Go
      •
      MIT License
      •4•1•2•1•Updated Nov 20, 2025Nov 20, 2025

    • rdm-wiki

      Public
      The RDM wiki written in reStructuredText and hosted on ReadTheDocs
      Python
      •1•0•17•0•Updated Nov 18, 2025Nov 18, 2025

    • Radboud-FUS-measurement-kit

      Public
      MATLAB
      •
      MIT License
      •0•7•35•0•Updated Nov 17, 2025Nov 17, 2025

    • dr-tools

      Public
      Tools for Donders Repository
      Go
      •
      MIT License
      •0•2•5•0•Updated Nov 6, 2025Nov 6, 2025

    • staff-scientists

      Public
      The consultancy page for the DCCN staff scientists
      1•2•6•0•Updated Oct 14, 2025Oct 14, 2025

    • Radboud-FUS-driving-system-software

      Public
      Python
      •
      MIT License
      •3•3•32•0•Updated Oct 1, 2025Oct 1, 2025

    • bidscramble

      Public
      BIDScramble generates pseudo-random BIDS datasets from existing BIDS datasets
      neuroimagingbidsdata-sharingimaginganonymization
      Python
      •
      GNU General Public License v3.0
      •0•0•2•0•Updated Jun 19, 2025Jun 19, 2025

    • meg_headcast

      Public
      Procedures for making MEG head casts
      MATLAB
      •0•5•0•0•Updated Jun 19, 2025Jun 19, 2025

    • multiecho

      Public
      Combine multiple-echoes from a multi-echo BOLD fMRI acquisition.
      fmribidsmulti-echo-timemulti-echo
      Python
      •
      Apache License 2.0
      •2•7•8•0•Updated Jun 17, 2025Jun 17, 2025

    • meg-pipeline

      Public
      MATLAB
      •0•2•0•0•Updated Jun 12, 2025Jun 12, 2025

    • MP2RAGE-related-scripts

      Public
      MP2RAGE Scripts - T1 map correction & Background noise removal
      mrineuroimagingbidsmp2ragebids-appst1mapb1map
      MATLAB
      •
      GNU General Public License v3.0
      •28•1•0•0•Updated Apr 28, 2025Apr 28, 2025

    • QuizzesMRImageEncodingForFMRI

      Public
      Set of tutorials used through out the years to introduce MR Image encoding, image acceleration image contrast and EPI sequences
      MATLAB
      •1•1•0•0•Updated Feb 5, 2025Feb 5, 2025

    • dicom-dataflow

      Public
      Services/components facilitating the DICOM dataflow to Orthanc
      Shell
      •
      MIT License
      •2•2•5•0•Updated Jan 28, 2025Jan 28, 2025

    • hpc-utility

      Public
      High Performance Computing (HPC) cluster utility
      Go
      •
      MIT License
      •0•2•1•0•Updated Dec 6, 2024Dec 6, 2024

    • git-workshop

      Public
      Repository accompanying the workshop "Collaborative version control with Git/Github"
      githubgitversion-controlcollaborationopen-science
      7•2•3•0•Updated Oct 30, 2024Oct 30, 2024

    • data-streamer

      Public
      A service and web UI for managing lab data flowing to the DCCN project storage and the Donders Repository
      JavaScript
      •
      MIT License
      •3•1•1•11•Updated Oct 17, 2024Oct 17, 2024

    • meg-hackathon

      Public
      MEG/EEG hackathon on Open Science, Coding Skills, etc.
      Shell
      •0•2•0•0•Updated Apr 3, 2024Apr 3, 2024

    • ni2-electrophys

      Public
      Material for the source reconstruction part of the "Neuroimaging II - Electrophysiology" course in the masters program for Cognitive Neuroscience
      MATLAB
      •2•10•4•0•Updated Feb 29, 2024Feb 29, 2024

    • Donders-LaTeX-Beamer

      Public
      TeX
      •0•0•0•0•Updated Feb 7, 2024Feb 7, 2024

    • infant-cluster-effectsize

      Public
      Enhancing reproducibility in developmental EEG research by using BIDS, cluster-based permutation tests, and reporting effect sizes
      matlabeegopen-dataopen-sciencebidsfieldtripeeg-analysis
      MATLAB
      •
      GNU General Public License v3.0
      •3•12•0•0•Updated Jan 30, 2024Jan 30, 2024

    • EEG-to-BIDS-conversion

      Public
      MATLAB
      •1•0•0•0•Updated Nov 17, 2023Nov 17, 2023

    • hpc-torque-helper

      Public
      Small service for retrieving job information that is only available to privileged users on the torque/moab server
      Go
      •0•2•0•0•Updated Aug 31, 2023Aug 31, 2023

    • theta-flicker-memory

      Public
      Investigating theta-induced effects on memory encoding in 4-year-olds
      MATLAB
      •0•1•0•0•Updated Jul 13, 2023Jul 13, 2023

    • dynamore-feature-extraction-runner

      Public
      A small deamon that submits HPC job to run feature extraction upon receiving payload message from a Redis server.
      Go
      •
      MIT License
      •0•0•0•0•Updated Mar 8, 2023Mar 8, 2023

    • mri_qc_dashboard

      Public
      MRI QC dashboard
      Python
      •0•0•0•0•Updated Feb 8, 2023Feb 8, 2023