Repositories list

• dcmqi

  Public
  dcmqi (DICOM for Quantitative Imaging) is a C++ library for conversion between imaging research formats and the standard DICOM representation for image analysis…

  dicomquantitative-imagingimaging-informatics+ 8

  dicomquantitative-imagingimaging-informaticsconverterscancer-imaging-researchmedical-image-computing3d-slicernci-itcrtcia-dacnci-qin+ 1

  C++

  •

  BSD 3-Clause "New" or "Revised" License

  •64•279•74•7•Updated Mar 16, 2026Mar 16, 2026

• Slicer-PETDICOMExtension

  Public
  3D Slicer extension containing tools for importing DICOM PET series

  3d-slicer3d-slicer-extension

  3d-slicer3d-slicer-extension

  C++

  •

  Other

  •14•20•5•0•Updated Mar 13, 2026Mar 13, 2026

• PET-IndiC

  Public
  UIowa QIN PET volume indices measurement tool for 3D Slicer

  3d-slicer3d-slicer-extension

  3d-slicer3d-slicer-extension

  Python

  •

  Other

  •2•0•1•0•Updated Mar 9, 2026Mar 9, 2026

• QuantitativeReporting

  Public
  Segmentation-based measurements with DICOM import and export of the results.

  dicomquantitative-imagingmedical-image-computing+ 4

  dicomquantitative-imagingmedical-image-computingnciitcrnci-itcrnci-qin3d-slicer-extension

  Python

  •

  Other

  •27•25•31•2•Updated Nov 26, 2025Nov 26, 2025

• TCIABrowser

  Public
  3D Slicer module for browsing and downloading medical imaging collections from The Cancer Imaging Archive (TCIA).

  3d-slicertcia-dacnci-qin+ 1

  3d-slicertcia-dacnci-qin3d-slicer-extension

  Python

  •

  Other

  •9•19•0•0•Updated Oct 24, 2025Oct 24, 2025

• dicom3tools

  Public archive
  This is an UN-OFFICIAL repository of the dicom3tools library by David Clunie. Official location: http://www.dclunie.com/dicom3tools/workinprogress/. Tags corres…

  dicommedical-imagingvalidators

  dicommedical-imagingvalidators

  Smarty

  •

  Other

  •3•8•1•0•Updated Jul 8, 2025Jul 8, 2025

• dcmtk-dcmqi

  Public
  This is a version of DCMTK that is customized for dcmqi CI (see dcmqi branch)

  C++

  •

  Other

  •3•0•0•0•Updated Mar 10, 2025Mar 10, 2025

• pydcmqi

  Public
  Easy access Python wrapper of the DCMQI library

  Python

  •

  MIT License

  •0•3•0•1•Updated Dec 23, 2024Dec 23, 2024

• DICOM4QI

  Public
  DICOM4QI is an open demonstration and connectathon with the purpose of promoting and improving the use of DICOM for exchanging the quantitative image analysis r…

  10•4•5•0•Updated Sep 23, 2024Sep 23, 2024

• PETLiverUptakeMeasurement

  Public
  3D Slicer Extension for measurement of liver uptake in PET scans

  3d-slicernci-qin3d-slicer-extension

  3d-slicernci-qin3d-slicer-extension

  C++

  •

  Other

  •1•0•0•0•Updated Jun 15, 2024Jun 15, 2024

• T1Mapping

  Public
  T1 mapping estimates effective tissue parameter maps (T1) from multi-spectral FLASH MRI scans with different flip angles.

  3d-slicer3d-slicer-extension

  3d-slicer3d-slicer-extension

  C++

  •2•1•0•1•Updated Jun 12, 2024Jun 12, 2024

• PETTumorSegmentation

  Public
  3D Slicer Extension for PETTumorSegmentation

  3d-slicernci-qin3d-slicer-extension

  3d-slicernci-qin3d-slicer-extension

  C++

  •

  Other

  •9•14•0•0•Updated Jun 11, 2024Jun 11, 2024

• SlicerLayoutButtons

  Public
  Python

  •

  Other

  •2•0•1•0•Updated May 14, 2024May 14, 2024

• PkModeling

  Public
  Slicer Extension providing pharmacokinetic modeling

  C++

  •

  Other

  •19•2•3•0•Updated Apr 23, 2024Apr 23, 2024

• DSC_Analysis

  Public
  Analysis of Dynamic Susceptibility Contrast (DSC) MRI

  C++

  •5•7•0•0•Updated Apr 23, 2024Apr 23, 2024

• SlicerDevelopmentToolbox

  Public
  API for 3D Slicer extension development providing widgets, mixins, helpers, decorators etc.

  eventsdevelopmentmixins+ 6

  eventsdevelopmentmixinsdecoratorshelperswidgetsslicernci-itcr3d-slicer-extension

  Python

  •

  Other

  •11•10•4•0•Updated Apr 23, 2024Apr 23, 2024

• dcmqi-guide

  Public
  Learning materials for https://github.com/qiicr/dcmqi

  dicomquantitative-imagingimaging-informatics+ 2

  dicomquantitative-imagingimaging-informaticsconvertersmedical-image-computing

  JavaScript

  •

  Other

  •2•3•2•0•Updated Feb 1, 2024Feb 1, 2024

• ITK-dcmqi

  Public
  This is a customized version of ITK to support dcmqi CI. It was manually and ugly stripped down to reduce build time and make continuous integration feasible.

  C++

  •

  Apache License 2.0

  •0•0•0•0•Updated Jan 10, 2023Jan 10, 2023

• zlib-dcmqi

  Public
  This is a version of zlib that is customized for dcmqi CI (see dcmqi branch)

  C

  •

  Other

  •17•0•0•0•Updated Jan 9, 2023Jan 9, 2023

• qiicr.github.io

  Public
  Web site for QIICR at http://qiicr.org

  JavaScript

  •

  MIT License

  •3•1•0•0•Updated Jul 22, 2022Jul 22, 2022

• SlicerPETPhantomAnalysis

  Public
  3D Slicer Extension for Analysis of Uniform Cylinder Phantom PET scans

  3d-slicer-extension

  3d-slicer-extension

  C++

  •

  Other

  •2•0•0•0•Updated May 26, 2022May 26, 2022

• lidc2dicom

  Public
  Scripts for converting TCIA LIDC-IDRI collection derived data into standard DICOM representation from project-specific XML format.

  Jupyter Notebook

  •11•27•5•0•Updated Jun 17, 2021Jun 17, 2021

• LongitudinalPETCT

  Public
  Longitudinal PET/CT Analysis Module for Slicer 4

  3d-slicer3d-slicer-extension

  3d-slicer3d-slicer-extension

  C++

  •

  Other

  •7•4•6•1•Updated Apr 7, 2021Apr 7, 2021

• QIN-PROSTATE-Repeatability-Radiomics

  Public
  Jupyter Notebook

  •

  MIT License

  •11•15•1•0•Updated Dec 6, 2020Dec 6, 2020

• SlicerGCPSetup

  Public
  0•1•2•0•Updated Nov 1, 2020Nov 1, 2020

• atom-dicom-dump

  Public
  Atom editor package for examining the content of DICOM files

  atomviewerdicom+ 3

  atomviewerdicomdcmtkdcmdumpdsrdump

  CoffeeScript

  •

  MIT License

  •1•6•3•0•Updated May 28, 2020May 28, 2020

• dcm2tables

  Public
  sqldicomrdb+ 3

  sqldicomrdbnci-itcrnci-qinnci-gdc

  Python

  •3•4•4•0•Updated Jul 18, 2019Jul 18, 2019

• dicom4miccai-handson

  Public
  Supporting materials for the MICCAI 2017 DICOM tutorial. See accompanying documentation at https://qiicr.gitbook.io/dicom4miccai-handson/

  tutorialhandsondicom+ 2

  tutorialhandsondicomnci-itcrnci-qin

  Jupyter Notebook

  •

  BSD 3-Clause "New" or "Revised" License

  •2•5•0•0•Updated Jun 5, 2019Jun 5, 2019

• dicom4miccai

  Public
  Web site for the DICOM4MICCAI tutorial at the MICCAI conference (2017 and 2018)

  dicomnci-itcr

  dicomnci-itcr

  HTML

  •

  MIT License

  •2•1•0•0•Updated Nov 14, 2018Nov 14, 2018

• CI4CC-Spring2016-ASW

  Public
  Web site for the Academic Technology Development in Cancer Research workshop at CI4CC Spring 2016 Symposium

  HTML

  •0•0•0•0•Updated Jul 12, 2018Jul 12, 2018