Repositories list

• sage-monorepo

  Public
  ✨ Monorepo for BioArena, Agora, and other open-source apps developed to advance open science and collaborative research.

  angularopenapimonorepo+ 9

  angularopenapimonorepofull-stackfairdeveloper-experiencenxagoradev-exspecification-first+ 2

  TypeScript

  •

  Apache License 2.0

  •1717 forks•2929 stars•1010 issues•77 pull requests•Updated Aug 17, 2026Aug 17, 2026

• Synapse-Repository-Services

  Public
  The Synapse Repository Services project is the home of the JSON REST web services for Synapse.

  Java

  •

  Apache License 2.0

  •6161 forks•4545 stars•00 issues•1818 pull requests•Updated Aug 17, 2026Aug 17, 2026

• SynapseWebClient

  Public
  The web client of the Synapse REST service core

  JavaScript

  •

  Apache License 2.0

  •4040 forks•2424 stars•11 issue•1212 pull requests•Updated Aug 17, 2026Aug 17, 2026

• Synapse-Stack-Builder

  Public
  Project for building a complete Synapse Stack

  Java

  •

  Apache License 2.0

  •2525 forks•66 stars•00 issues•99 pull requests•Updated Aug 16, 2026Aug 16, 2026

• core-models

  Public
  Sage repository for data models and core models work

  JavaScript

  •11 fork•44 stars•44 issues•1818 pull requests•Updated Aug 16, 2026Aug 16, 2026

• synapse-markdown-it-lambda

  Public
  A lambda function to support markdown to html in Synapse

  JavaScript

  •11 fork•00 stars•00 issues•00 pull requests•Updated Aug 15, 2026Aug 15, 2026

• agora-data-tools

  Public
  A place for Agora's ETL and Data Testing

  Python

  •

  Apache License 2.0

  •55 forks•33 stars•00 issues•99 pull requests•Updated Aug 15, 2026Aug 15, 2026

• synapsePythonClient

  Public
  Programmatic interface to Synapse services for Python

  pythonsynapsebdf-toolbox

  pythonsynapsebdf-toolbox

  Python

  •

  Apache License 2.0

  •7676 forks•8282 stars•22 issues•1111 pull requests•Updated Aug 15, 2026Aug 15, 2026

• synapse-web-monorepo

  Public
  Monorepo for Synapse Web projects

  TypeScript

  •

  Apache License 2.0

  •3939 forks•1111 stars•55 issues•4040 pull requests•Updated Aug 14, 2026Aug 14, 2026

• Synapse-Migration-Utility

  Public
  Utility to migrate one Synapse stack to another

  Java

  •

  Apache License 2.0

  •55 forks•00 stars•00 issues•00 pull requests•Updated Aug 14, 2026Aug 14, 2026

• sagebrain-model

  Public
  Development of a graph-centric model for Sage Brain

  00 forks•00 stars•11 issue•00 pull requests•Updated Aug 14, 2026Aug 14, 2026

• synapse-mcp

  Public
  A Model Context Protocol (MCP) server that enables AI agent access to Synapse. Deployed into AWS ECS via https://github.com/Sage-Bionetworks-IT/synapse-mcp-infr…

  Python

  •

  MIT License

  •00 forks•33 stars•00 issues•44 pull requests•Updated Aug 14, 2026Aug 14, 2026

• synapse-login-scipool

  Public
  scipoolsage-bionetworks-it

  scipoolsage-bionetworks-it

  Java

  •

  Apache License 2.0

  •33 forks•00 stars•00 issues•00 pull requests•Updated Aug 14, 2026Aug 14, 2026

• sageassembly.org

  Public
  Sage Assembly 2026 website

  HTML

  •

  Apache License 2.0

  •00 forks•00 stars•00 issues•00 pull requests•Updated Aug 14, 2026Aug 14, 2026

• model-ad-data-manager

  Public
  Shell

  •

  Apache License 2.0

  •55 forks•00 stars•00 issues•11 pull request•Updated Aug 14, 2026Aug 14, 2026

• snowflake

  Public
  Snowflake Administration, Transformations, and Analytics

  snowflake

  snowflake

  Python

  •

  Apache License 2.0

  •55 forks•66 stars•00 issues•1212 pull requests•Updated Aug 13, 2026Aug 13, 2026

• genie-bpc-pipeline

  Public
  GENIE BPC pipeline scripts

  genie

  genie

  R

  •

  MIT License

  •11 fork•44 stars•00 issues•33 pull requests•Updated Aug 13, 2026Aug 13, 2026

• synapse-docker-registry

  Public
  ECS deployment for the Synapse Docker registry

  Python

  •22 forks•00 stars•00 issues•00 pull requests•Updated Aug 12, 2026Aug 12, 2026

• synapser

  Public
  An R package providing programmatic access to Synapse

  rsynapse

  rsynapse

  R

  •

  Apache License 2.0

  •2222 forks•3737 stars•44 issues•33 pull requests•Updated Aug 11, 2026Aug 11, 2026

• agora-data-manager

  Public
  Tool to manage agora data

  Shell

  •

  Apache License 2.0

  •1010 forks•00 stars•00 issues•11 pull request•Updated Aug 11, 2026Aug 11, 2026

• bridge-utils

  Public
  Utility scripts for Bridge

  Shell

  •00 forks•00 stars•00 issues•00 pull requests•Updated Aug 10, 2026Aug 10, 2026

• react-datasheet-grid

  Public
  An Airtable-like / Excel-like component to create beautiful spreadsheets.

  TypeScript

  •

  MIT License

  •214214 forks•00 stars•00 issues•11 pull request•Updated Aug 10, 2026Aug 10, 2026

• Synapse-Stack-Review-Agenda

  Public
  This is the agenda for the weekly Synapse stack release meeting

  HTML

  •55 forks•00 stars•00 issues•00 pull requests•Updated Aug 10, 2026Aug 10, 2026

• ChallengeWorkflowTemplates

  Public
  A collection of challenge CWL tool and workflow templates to connect with SynapseWorkflowOrchestrator.

  Common Workflow Language

  •

  Apache License 2.0

  •22 forks•33 stars•11 issue•11 pull request•Updated Aug 10, 2026Aug 10, 2026

• SageCommonDataModel

  Public
  Describes Data Coordinating Centers and Portals maintained by Sage

  Apache License 2.0

  •00 forks•11 star•00 issues•33 pull requests•Updated Jul 29, 2026Jul 29, 2026

• BridgeServer2

  Public
  Bridge Server 2.0 running on Spring Boot

  Java

  •

  Other

  •2525 forks•55 stars•00 issues•00 pull requests•Updated Jul 24, 2026Jul 24, 2026

• BridgeWorkerPlatform

  Public
  General platform holding all services in Bridge

  Java

  •

  Other

  •1414 forks•11 star•00 issues•44 pull requests•Updated Jul 24, 2026Jul 24, 2026

• Bridge-Exporter

  Public
  Worker app to aggregate Bridge uploads, survey answers, and health data daily, and export them to Synapse

  Java

  •

  Other

  •99 forks•00 stars•00 issues•33 pull requests•Updated Jul 24, 2026Jul 24, 2026

• bioregistry-collection

  Public
  A Sage-curated list of bioregistry.io prefixes to use on Synapse.org

  Python

  •

  Apache License 2.0

  •33 forks•11 star•00 issues•11 pull request•Updated Jul 24, 2026Jul 24, 2026

• sagebrain-app-poc

  Public
  POC app for sage-brain

  Python

  •00 forks•11 star•00 issues•00 pull requests•Updated Jul 24, 2026Jul 24, 2026