csiro-crop-informatics

All

15 repositories

fieldprime_server
Public
REST-API for the data collection android application fieldprime_app
field-trial field-experiments
Python
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Other
•2•0•1•18•Updated Jun 26, 2024Jun 26, 2024
repset
Public
Reproducible evaluation of short read mappers
dockerfiles bioinformatics reproducible-research rmarkdown bioinformatics-pipeline reproducibility bioinformatics-containers bioinformatics-analysis reproducible-paper alignment-algorithm
Nextflow
•
GNU General Public License v3.0
•3•2•14•0•Updated Mar 19, 2022Mar 19, 2022
rsenaps
Public
R
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Other
•2•1•4•0•Updated Sep 17, 2021Sep 17, 2021
granular
Public
A wrapper and shiny app for mixdist specifically applied to starch granule distributions
rstats
R
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GNU General Public License v3.0
•1•0•3•0•Updated Jun 4, 2020Jun 4, 2020
fieldprime_app
Public
An android app for data collection and synchronisation
Java
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Other
•1•0•0•0•Updated May 8, 2020May 8, 2020
nextflow-c3dis2020
Public
0•0•0•0•Updated Feb 29, 2020Feb 29, 2020
nextflow-embl-abr-webinar
Public
Nextflow
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Apache License 2.0
•1•5•0•0•Updated Sep 26, 2019Sep 26, 2019
biokanga
Public
An integrated high performance bioinformatics toolkit
C++
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Other
•4•23•3•0•Updated Apr 24, 2019Apr 24, 2019
miappe-json-river
Public
Perl scripts for loading the MIAPPE standard from JSON format into a River system.
Ragel
•0•0•0•0•Updated Jan 31, 2019Jan 31, 2019
aligner_benchmark
Public
HTML
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MIT License
•4•1•0•0•Updated Oct 17, 2018Oct 17, 2018
biokanga_align_paper
Public
Nextflow
•0•0•5•0•Updated Aug 15, 2018Aug 15, 2018
reproducible_poc
Public
Nextflow
•1•1•2•0•Updated Jun 22, 2018Jun 22, 2018
biokanga_benchmark
Public
HTML
•1•0•0•0•Updated Mar 15, 2018Mar 15, 2018
magicCalling
Public
Code for genotype calling in the MAGIC population.
R
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Other
•1•0•0•0•Updated Nov 24, 2017Nov 24, 2017
starch_granule_classification
Public
R
•2•0•0•0•Updated Mar 1, 2017Mar 1, 2017