Galaxy Project

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141 repositories

galaxy
Public
Data intensive science for everyone.
science workflow bioinformatics pipeline genomics workflow-engine ngs sequencing dna usegalaxy
Python
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Other
•1k•1.5k•2.1k•274•Updated Feb 15, 2025Feb 15, 2025
galaxy_codex
Public
Galaxy Communities Dock aka Galaxy Codex: catalog of Galaxy resources (tools, training, workflows)
HTML
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MIT License
•16•8•49•13•Updated Feb 15, 2025Feb 15, 2025
brc-analytics
Public
TypeScript
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MIT License
•5•0•50•4•Updated Feb 15, 2025Feb 15, 2025
galaxy-hub
Public
Galaxy Community Hub
community documentation home homepage hub usegalaxy hacktoberfest
HTML
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Other
•287•101•174•30•Updated Feb 15, 2025Feb 15, 2025
training-material
Public
A collection of Galaxy-related training material
training tutorial materials ngs metagenomics rnaseq proteomics chip-seq usegalaxy hacktoberfest
HTML
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MIT License
•933•324•298•52•Updated Feb 15, 2025Feb 15, 2025
galaxy-k8s-boot
Public
Jinja
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MIT License
•2•0•3•2•Updated Feb 14, 2025Feb 14, 2025
usegalaxy-playbook
Public
Ansible Playbook for usegalaxy.org
python ansible playbook usegalaxy
Shell
•
Academic Free License v3.0
•25•31•98•2•Updated Feb 14, 2025Feb 14, 2025
ga2
Public
TypeScript
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MIT License
•0•0•20•3•Updated Feb 14, 2025Feb 14, 2025
usegalaxy-tools
Public
usegalaxy.* common tools
Shell
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MIT License
•54•12•71•7•Updated Feb 14, 2025Feb 14, 2025
galaxy-helm
Public
Minimal setup required to run Galaxy under Kubernetes
Python
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MIT License
•40•42•32•3•Updated Feb 14, 2025Feb 14, 2025
jxtx
Public
JavaScript
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MIT License
•2•2•19•0•Updated Feb 14, 2025Feb 14, 2025
iwc
Public
Galaxy Workflows maintained by the Intergalactic Workflow Commission
workflow hackathon usegalaxy
Python
•73•32•39•74•Updated Feb 14, 2025Feb 14, 2025
galaxy-release-util
Public
galaxy-release-util
Python
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MIT License
•4•1•0•1•Updated Feb 14, 2025Feb 14, 2025
tools-iuc
Public
Tool Shed repositories maintained by the Intergalactic Utilities Commission
tools usegalaxy hacktoberfest toolshed wrappers iuc
HTML
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MIT License
•446•168•424•307•Updated Feb 14, 2025Feb 14, 2025
galaxy-maps
Public
MIT License
•20•3•1•0•Updated Feb 13, 2025Feb 13, 2025
tools-devteam
Public
Contains a set of Galaxy Tools mostly written by the Galaxy Team.
tools usegalaxy toolshed
Python
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Other
•94•36•60•15•Updated Feb 12, 2025Feb 12, 2025
tpv-shared-database
Public
A shared database of rules for Total Perspective Vortex used by the usegalaxy.* federation.
MIT License
•12•4•15•4•Updated Feb 12, 2025Feb 12, 2025
gxy.io
Public
The gxy.io link shortening service
Shell
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MIT License
•9•8•0•0•Updated Feb 12, 2025Feb 12, 2025
gx-it-proxy
Public
JavaScript
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MIT License
•9•3•4•1•Updated Feb 10, 2025Feb 10, 2025
infrastructure-playbook
Public
Ansible playbook for managing Galaxy infrastructure. For the playbook managing Galaxy itself, see https://github.com/galaxyproject/usegalaxy-playbook/
Jinja
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MIT License
•14•11•6•7•Updated Feb 7, 2025Feb 7, 2025
galaxy-docker-k8s
Public
An Ansible playbook for building a Galaxy container for Kubernetes.
HTML
•
MIT License
•15•9•2•0•Updated Feb 5, 2025Feb 5, 2025
bioblend
Public
A Python library for interacting with the Galaxy API
api api-client usegalaxy cloudman hacktoberfest
Python
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MIT License
•115•90•29•6•Updated Feb 4, 2025Feb 4, 2025
galaxy-helm-deps
Public
Environmental dependencies required by the Galaxy helm chart, such as operators.
MIT License
•1•0•0•0•Updated Feb 3, 2025Feb 3, 2025
galaxy-charts
Public
Vue
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MIT License
•0•0•0•0•Updated Jan 31, 2025Jan 31, 2025
gxadmin
Public
Handy command line utility for Galaxy administrators 🚀
automation sql sysadmin galaxy galaxy-project hacktoberfest postgres-databases
Shell
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GNU General Public License v3.0
•28•23•13•3•Updated Jan 31, 2025Jan 31, 2025
total-perspective-vortex
Public
Total Perspective Vortex provides an installable set of dynamic rules for the Galaxy application that can route entities (Tools, Users, Roles) to appropriate job destinations based on a configurable yaml file.
Python
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MIT License
•12•13•16•8•Updated Jan 28, 2025Jan 28, 2025
galaxykubeman-helm
Public
Helm chart for Galaxy KubeMan used for deploying Galaxy alongside its dependencies (NFS, CVMFS, and CloudMan)
Shell
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MIT License
•4•1•3•4•Updated Jan 24, 2025Jan 24, 2025
slurmscale-playbook
Public
Ansible Playbook for usegalaxy.org SlurmScale
MIT License
•0•0•0•0•Updated Jan 24, 2025Jan 24, 2025
ansible-slurm
Public
Ansible role for installing and managing the Slurm Workload Manager
Jinja
•48•92•19•16•Updated Jan 23, 2025Jan 23, 2025
ansible-nginx
Public
An Ansible role for managing an nginx server.
Jinja
•10•8•3•0•Updated Jan 22, 2025Jan 22, 2025