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    62 repositories

    • seurat-de-2025

      Public
      scRNA-seq Differential Expression workshop
      Other
      •3•0•0•0•Updated Mar 10, 2026Mar 10, 2026

    • intro-to-rna-seq

      Public
      R
      •
      Other
      •0•0•0•0•Updated Mar 10, 2026Mar 10, 2026

    • intro-to-proteomics

      Public
      R
      •
      Other
      •2•0•0•0•Updated Mar 10, 2026Mar 10, 2026

    • intro-to-genome-browsers

      Public
      Melbourne Bioinformatics Introduction to Genome Browsers workshop materials.
      R
      •
      Other
      •1•0•0•0•Updated Mar 10, 2026Mar 10, 2026

    • intro-to-git

      Public
      Intro to Git and GitHub for researchers
      Other
      •2•0•0•1•Updated Mar 10, 2026Mar 10, 2026

    • rna-pathways

      Public
      Other
      •3•0•0•0•Updated Mar 10, 2026Mar 10, 2026

    • Introduction-to-Unix

      Public
      R
      •
      Other
      •1•0•0•0•Updated Mar 10, 2026Mar 10, 2026

    • intro-to-r

      Public
      R
      •
      Other
      •0•0•0•0•Updated Mar 10, 2026Mar 10, 2026

    • workbench-template-rmd

      Public template
      MB/UoM TEMPLATE for R Markdown lessons
      R
      •
      Other
      •15•0•0•0•Updated Mar 10, 2026Mar 10, 2026

    • abacbs-2025-metagenomics-workshop

      Public
      Material for the "Making Sense of Metagenomes" workshop for ABACBS 2025 in Adelaide, SA.
      R
      •
      Other
      •0•1•0•0•Updated Mar 10, 2026Mar 10, 2026

    • workbench-template-md

      Public template
      TEMPLATE for markdown lessons
      Dockerfile
      •
      Other
      •29•0•0•1•Updated Mar 10, 2026Mar 10, 2026

    • rna-seq-counts-to-genes

      Public
      An introduction to RNA-seq analysis: counts to differentially expressed genes
      R
      •
      Other
      •0•0•0•0•Updated Mar 10, 2026Mar 10, 2026

    • nectar-instances

      Public
      R
      •
      Other
      •0•0•0•0•Updated Mar 10, 2026Mar 10, 2026

    • intro-QIIME2-mammal

      Public
      Other
      •0•0•1•0•Updated Mar 6, 2026Mar 6, 2026

    • melbournebioinformatics.github.io

      Public
      Melbourne Bioinformatics documentation in markdown format
      HTML
      •80•118•0•0•Updated Mar 4, 2026Mar 4, 2026

    • slurm-docker-cluster

      Public
      A Slurm cluster using docker-compose
      Shell
      •
      MIT License
      •251•0•0•0•Updated Feb 16, 2026Feb 16, 2026

    • mbite

      Public
      Repo for testing out relaunch of MBITE
      HTML
      •0•0•0•0•Updated Jan 20, 2026Jan 20, 2026

    • training-program-application-2026

      Public
      Repository for the training program exercise
      R
      •74•0•0•0•Updated Jan 12, 2026Jan 12, 2026

    • Variant-calling-using-GATK4

      Public
      Other
      •1•0•0•0•Updated Dec 16, 2025Dec 16, 2025

    • jupyterlite

      Public
      JupyterLite instance for Melbourne Bioinformatics
      Jupyter Notebook
      •0•0•0•0•Updated Dec 4, 2025Dec 4, 2025

    • uom-varnish

      Public
      Template for pkgdown site
      SCSS
      •
      Other
      •61•0•0•0•Updated Nov 5, 2025Nov 5, 2025

    • python_gc_content

      Public
      Example Git repository with Python code to calculate GC content of a FASTA file.
      Python
      •33•0•1•0•Updated Aug 1, 2025Aug 1, 2025

    • COMP90016

      Public
      Material assoicated with teaching the subject COMP90016
      CSS
      •
      MIT License
      •1•4•0•0•Updated Jul 29, 2025Jul 29, 2025

    • COMP90016-envs

      Public
      Environment config settings for COMP90016 workshops and assignments.
      GNU General Public License v3.0
      •0•0•0•0•Updated Jun 12, 2025Jun 12, 2025

    • training-infrastructure

      Public
      HCL
      •
      MIT License
      •4•1•0•1•Updated May 12, 2025May 12, 2025

    • seurat-de

      Public
      Gene ontology analysis and integration for single-cell RNA-seq data
      R
      •
      Other
      •0•0•1•0•Updated Apr 15, 2025Apr 15, 2025

    • nf-genomics-demo

      Public
      Nextflow Genomics demo
      Nextflow
      •0•0•0•0•Updated Apr 8, 2025Apr 8, 2025

    • R_gc_content

      Public
      Example Git repository with R code to calculate GC content of a FASTA file.
      R
      •
      MIT License
      •16•1•0•0•Updated Dec 3, 2024Dec 3, 2024

    • Seurat_DE_Workshop

      Public
      1•0•0•0•Updated Oct 11, 2024Oct 11, 2024

    • gitgood

      Public
      0•0•0•0•Updated Oct 10, 2024Oct 10, 2024