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@ontoportal-lirmm OntoPortal code LIRMM branch

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    18 repositories

    • bioportal_web_ui

      Public
      A Rails application for ontologies portal.
      railswebowlontologyskoswebsemanticsontoportal
      Ruby
      •
      Other
      •37•6•114•10•Updated Oct 22, 2025Oct 22, 2025

    • ontologies_api

      Public
      Hypermedia API for ontologies
      rubywebrdfowlontologyskoswebsemantics
      Ruby
      •
      Other
      •29•2•6•8•Updated Oct 21, 2025Oct 21, 2025

    • ontologies_linked_data

      Public
      Models and serializers for ontologies and related artifacts backed by 4store
      Ruby
      •
      Other
      •23•0•13•2•Updated Oct 21, 2025Oct 21, 2025

    • ncbo_cron

      Public
      Jobs that run on a regular basis in the NCBO infrastructure
      Ruby
      •
      Other
      •19•0•1•4•Updated Oct 14, 2025Oct 14, 2025

    • goo

      Public
      Graph Oriented Objects (GOO) for Ruby. A RDF/SPARQL based ORM.
      Ruby
      •
      Other
      •13•0•3•1•Updated Jul 23, 2025Jul 23, 2025

    • sparql-client

      Public
      SPARQL client for Ruby.
      Ruby
      •
      The Unlicense
      •56•0•0•1•Updated Jul 23, 2025Jul 23, 2025

    • ontologies_api_ruby_client

      Public
      A Ruby client for accessing NCBO's hypermedia api
      Ruby
      •
      Other
      •13•0•0•1•Updated Jul 3, 2025Jul 3, 2025

    • owlapi_wrapper

      Public
      A command line utility that wraps the Java OWL-API to parse RDFS, OWL and OBO ontologies.
      Java
      •12•0•0•0•Updated Jun 19, 2025Jun 19, 2025

    • ontoportal_docker

      Public
      Scripts for running and developing OntoPortal with docker
      Shell
      •11•0•1•0•Updated Jun 2, 2025Jun 2, 2025

    • ncbo_annotator

      Public
      To automatically process a piece of data text to annotate it with relevant ontology concepts and return the annotations.
      Ruby
      •
      Other
      •15•1•13•0•Updated May 10, 2025May 10, 2025

    • ontoportal-docker-swarm

      Public
      Run OntoPortal API and UI using docker sawrm in a linux server
      Shell
      •1•0•0•0•Updated Apr 28, 2025Apr 28, 2025

    • lov_migration

      Public
      Ruby
      •1•0•0•0•Updated Mar 17, 2025Mar 17, 2025

    • annotators

      Public
      Web service to add functionalities to the http://bioportal.bioontology.org and similar ontology annotators
      Java
      •5•5•16•0•Updated Feb 17, 2025Feb 17, 2025

    • migration-to-virtuoso

      Public
      Ruby
      •0•0•0•0•Updated Jan 20, 2025Jan 20, 2025

    • ncbo_ontology_recommender

      Public
      OntoPortal Recommender which recommends relevant ontologies for text or keywords
      Ruby
      •
      Other
      •7•0•0•0•Updated Sep 30, 2024Sep 30, 2024

    • bubastis

      Public
      Bubastis is an ontology diff tool
      JavaScript
      •
      Apache License 2.0
      •4•0•0•0•Updated Sep 2, 2024Sep 2, 2024

    • documentation

      Public
      Instructions for installing the OntoPortal Virtual Appliance (3.0 and later)
      SCSS
      •
      BSD 2-Clause "Simplified" License
      •11•0•0•0•Updated May 14, 2024May 14, 2024

    • ncboproxy

      Public
      General REST proxy architecture for the seamless extension of APIs based on the NCBO BioPortal technology
      HTML
      •
      Apache License 2.0
      •1•1•2•0•Updated Feb 23, 2022Feb 23, 2022