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Close #283 update Dockerfile and README #284

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34 changes: 32 additions & 2 deletions Dockerfile
Original file line number Diff line number Diff line change
Expand Up @@ -4,9 +4,20 @@ RUN apt-get update \
&& apt-get install -y --no-install-recommends \
ca-certificates \
curl \
libxml2-dev \
libcurl4-openssl-dev \
zlib1g-dev \
libfontconfig1-dev \
libharfbuzz-dev libfribidi-dev \
libfreetype6-dev libpng-dev libtiff5-dev libjpeg-dev \
libmbedtls-dev cmake \
libnng-dev xz-utils\
libcairo2-dev \
libgit2-dev \
pkgconf \
&& apt-get clean \
&& rm -rf /var/lib/apt/lists/* \
&& curl -o quarto.deb -L https://github.com/quarto-dev/quarto-cli/releases/download/v1.4.550/quarto-1.4.550-linux-amd64.deb \
&& curl -o quarto.deb -L https://github.com/quarto-dev/quarto-cli/releases/download/v1.6.42/quarto-1.6.42-linux-arm64.deb \
&& dpkg --install quarto.deb \
&& rm -f quarto.deb \
&& R -e 'install.packages(c( \
Expand All @@ -23,4 +34,23 @@ RUN apt-get update \
"metacore", \
"metatools", \
"xportr", \
"pharmaverseadam"))'
"pharmaverseadam", \
"link", \
"sessioninfo", \
"rtables", \
"teal", \
"riskmetric", \
"tidyCDISC", \
"mirai", \
"dverse", \
"DT", \
"xportr", \
"sdtm.oak", \
"teal", \
"riskmetric", \
"tidyCDISC", \
"admiralonco", \
"admiralophtha", \
"admiralpeds", \
"admiralvaccine", \
"admiralmetabolic"))'
59 changes: 37 additions & 22 deletions README.md
Original file line number Diff line number Diff line change
Expand Up @@ -93,28 +93,43 @@ Most importantly:

* You can use this code snippet to install all packages needed for the blog site or use the docker image cited below.
```
install.packages(c("jsonlite",
"tidyverse",
"spelling",
"janitor",
"diffdf",
"admiral",
"patchwork",
"here",
"reactable",
"pharmaversesdtm",
"metacore",
"metatools",
"xportr",
"pharmaverseadam",
"link",
"sessioninfo",
"rtables",
"teal",
"riskmetric",
"tidyCDISC",
"mirai",
"admiralmetabolic"))
install.packages(
c(
"jsonlite",
"tidyverse",
"spelling",
"janitor",
"diffdf",
"admiral",
"patchwork",
"here",
"reactable",
"pharmaversesdtm",
"metacore",
"metatools",
"xportr",
"pharmaverseadam",
"link",
"sessioninfo",
"rtables",
"teal",
"riskmetric",
"tidyCDISC",
"mirai",
"dverse",
"DT",
"xportr",
"sdtm.oak",
"teal",
"riskmetric",
"tidyCDISC",
"admiralonco",
"admiralophtha",
"admiralpeds",
"admiralvaccine",
"admiralmetabolic"
)
)
```
## How to Use the `blog` Docker Image for Local Development

Expand Down