microbial diversity analysis package based on IGS for whole-genome shotgun metagenomic data
a tutorial to show the basic function (under construction): https://github.com/qingpeng/khmer-recipes/blob/alpha/008-diversity_IGS/index.rst
demo scripts and test data for the tutorial: https://github.com/qingpeng/khmer-recipes/tree/alpha/008-diversity_IGS
Details about this method are described in my thesis (especially chapter 5): https://github.com/qingpeng/qingpeng-thesis/blob/master/qingpeng-thesis.pdf