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fix a problem in installing LAML with preprocessing
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laml_libs/__init__.py

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@@ -18,6 +18,3 @@
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dmin = 0.005
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dmax = 10
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DEFAULT_STRATEGY={'resolve_search_only':False,'only_marked':False,'ultra_constr':False,'fixed_phi':None,'fixed_nu':None,'local_brlen_opt':True}
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######
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from . import preprocess as pp

setup.py

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@@ -35,9 +35,8 @@ def recursive_list_dir(path):
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'include_package_data': True,
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'scripts': ['run_laml.py', 'laml_tests.py', 'extra_laml_tests.py'],
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'zip_safe': True,
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#'setup_requires': ['numpy'],
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'install_requires': ['scipy>=1.3.1', 'cvxpy>=1.4', 'treeswift>=1.1.39', 'Mosek>=10.1.16',
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'Biopython>=1.71','joblib','matplotlib>=2.2.2','setuptools'],
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'Biopython>=1.71','matplotlib>=2.2.2','setuptools'],
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'keywords': 'Phylogenetics Evolution Computational Maximum-likelihood Lineage Tracing',
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'long_description': """LAML is a maximum likelihood algorithm under the Probabilistic Mixed-type Missing (PMM) model. Given a lineage tracing experiment character matrix with heterogeneous per-site alphabets and mutation probabilities, LAML will find a maximum likelihood tree topology and estimate branch lengths as well as stochastic dropout and heritable silencing missing data rates.""",
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'classifiers': [

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