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#' @title Nanoparquet format | ||
#' @export | ||
#' @keywords storage formats | ||
#' @description Nanoparquet storage format for data frames. | ||
#' Uses [nanoparquet::read_parquet()] and [nanoparquet::write_parquet()] | ||
#' to read and write data frames returned by targets in a pipeline. | ||
#' Note: attributes such as `dplyr` row groupings and `posterior` | ||
#' draws info are dropped during the writing process. | ||
#' @return A [targets::tar_format()] storage format specification string | ||
#' that can be directly supplied to the `format` argument of | ||
#' [targets::tar_target()] or [targets::tar_option_set()]. | ||
#' @param compression Character string, compression type for saving the | ||
#' data. See the `compression` argument of [nanoparquet::write_parquet()] | ||
#' for details. | ||
#' @param class Character vector with the data frame subclasses to assign. | ||
#' See the `class` argument of [nanoparquet::parquet_options()] for details. | ||
#' @examples | ||
#' if (identical(Sys.getenv("TAR_LONG_EXAMPLES"), "true")) { | ||
#' targets::tar_dir({ # tar_dir() runs code from a temporary directory. | ||
#' targets::tar_script({ | ||
#' library(targets) | ||
#' libary(tarchetypes) | ||
#' list( | ||
#' tar_target( | ||
#' name = data, | ||
#' command = airquality, | ||
#' format = tar_format_nanoparquet() | ||
#' ) | ||
#' ) | ||
#' }) | ||
#' tar_make() | ||
#' tar_read(data) | ||
#' }) | ||
#' } | ||
tar_format_nanoparquet <- function(compression = "snappy", class = "tbl") { | ||
rlang::check_installed("nanoparquet") | ||
read <- function(path) {} | ||
body(read) <- substitute( | ||
tarchetypes::tar_nanoparquet_read(path, class), | ||
env = list(class = class) | ||
) | ||
write <- function(object, path) {} | ||
body(write) <- substitute( | ||
tarchetypes::tar_nanoparquet_write(object, path, compression), | ||
env = list(compression = compression) | ||
) | ||
convert <- function(object) {} | ||
body(convert) <- substitute( | ||
tarchetypes::tar_nanoparquet_convert(object, class), | ||
env = list(class = class) | ||
) | ||
targets::tar_format(read = read, write = write, convert = convert) | ||
} | ||
|
||
#' @title Nanoparquet read method | ||
#' @export | ||
#' @keywords internal | ||
#' @description Internal function. | ||
#' @param path Path to the data. | ||
#' @param class S3 classes to assign to the returned object. | ||
tar_nanoparquet_read <- function(path, class) { | ||
nanoparquet::read_parquet( | ||
file = path, | ||
options = nanoparquet::parquet_options( | ||
class = class, | ||
use_arrow_metadata = TRUE | ||
) | ||
) | ||
} | ||
|
||
#' @title Nanoparquet write method | ||
#' @export | ||
#' @keywords internal | ||
#' @description Internal function. | ||
#' @param object R object to save. | ||
#' @param path Path to the data. | ||
#' @param compression Compression type. | ||
tar_nanoparquet_write <- function(object, path, compression) { | ||
nanoparquet::write_parquet( | ||
x = object, | ||
file = path, | ||
compression = compression, | ||
options = nanoparquet::parquet_options(write_arrow_metadata = TRUE) | ||
) | ||
} | ||
|
||
#' @title Nanoparquet convert method | ||
#' @export | ||
#' @keywords internal | ||
#' @description Internal function. | ||
#' @param object R object to convert. | ||
#' @param class S3 classes to assign to the returned object. | ||
tar_nanoparquet_convert <- function(object, class) { | ||
class(object) <- c(class, "data.frame") | ||
object | ||
} |
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