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Merge pull request #97 from rseng/update/analysis-2023-11-22
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Update from update/analysis-2023-11-22
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vsoch authored Nov 22, 2023
2 parents 7f45475 + 3a8424b commit 06b8f7d
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14 changes: 7 additions & 7 deletions _data/language_counts.json
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@@ -1,14 +1,14 @@
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Expand Down Expand Up @@ -56,7 +56,7 @@
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85 changes: 81 additions & 4 deletions _data/repos.json
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Expand Up @@ -18845,7 +18845,48 @@
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"single-cell-analysis",
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"co-expression",
"complex-networks",
"gene-network-inference",
"gene-expression-profiles",
"network-fusion",
"biomarkers"
],
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Expand Down Expand Up @@ -24029,7 +24070,19 @@
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Expand Down Expand Up @@ -29213,7 +29266,19 @@
"github/hz1010/FIPRESCI_data_analysis": "https://github.com/hz1010/FIPRESCI_data_analysis",
"github/lnscan/mitoSplitter": "https://github.com/lnscan/mitoSplitter",
"github/precice/micro-manager": "https://github.com/precice/micro-manager",
"github/MikeSWang/Triumvirate": "https://github.com/MikeSWang/Triumvirate"
"github/MikeSWang/Triumvirate": "https://github.com/MikeSWang/Triumvirate",
"github/Joost987/MONDPMesh": "https://github.com/Joost987/MONDPMesh",
"github/orbisgis/lczexplore": "https://github.com/orbisgis/lczexplore",
"github/scikit-tda/DREiMac": "https://github.com/scikit-tda/DREiMac",
"github/zhangjunpeng411/Scan": "https://github.com/zhangjunpeng411/Scan",
"github/sandialabs/pvOps": "https://github.com/sandialabs/pvOps",
"github/DEIB-GECO/genereg": "https://github.com/DEIB-GECO/genereg",
"github/DEIB-GECO/GeneNetFusion": "https://github.com/DEIB-GECO/GeneNetFusion",
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"github/DEIB-GECO/OpenGDC": "https://github.com/DEIB-GECO/OpenGDC",
"github/spiketools/spiketools": "https://github.com/spiketools/spiketools",
"github/younglab/origami": "https://github.com/younglab/origami",
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Expand Down Expand Up @@ -34397,6 +34462,18 @@
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4 changes: 2 additions & 2 deletions _data/repos_counts_languages.json
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@@ -1,6 +1,6 @@
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8 changes: 4 additions & 4 deletions _data/stats.json
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@@ -1,9 +1,9 @@
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4 changes: 2 additions & 2 deletions _repos/github/CRPropa/CRPropa3/CMakeLists.txt
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Expand Up @@ -8,7 +8,7 @@ else(APPLE)
endif(APPLE)

project(CRPropa Fortran C CXX)
set(CRPROPA_RELEASE_VERSION 3.2+) # Update for new release
set(CRPROPA_RELEASE_VERSION 3.2.1+) # Update for new release

set(CMAKE_MODULE_PATH "${CMAKE_SOURCE_DIR}/cmake" ${CMAKE_MODULE_PATH})

Expand Down Expand Up @@ -232,7 +232,7 @@ if(FFTW3F_FOUND)
endif(FFTW3F_FOUND)

# Quimby (optional for SPH magnetic fields)
option(ENABLE_QUIMBY "Quimby Support" ON)
option(ENABLE_QUIMBY "Quimby Support" OFF)
if(ENABLE_QUIMBY)
find_package(Quimby)
if(QUIMBY_FOUND)
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141 changes: 141 additions & 0 deletions _repos/github/DEIB-GECO/GeneNetFusion/README.md
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---
title: github/DEIB-GECO/GeneNetFusion
layout: repo
tipue_search_active: true
exclude_from_search: true
---
# Software Credit

|Manager|Name|Credit|
|-------|----|------|
|pypi|[six](https://pypi.org/project/six)|0.012|
|requirements.txt|github/DEIB-GECO/GeneNetFusion|0.01|
|pypi|[absl-py](https://github.com/abseil/abseil-py)|0.008|
|pypi|[alabaster](https://alabaster.readthedocs.io)|0.008|
|pypi|[appnope](http://github.com/minrk/appnope)|0.008|
|pypi|[attrs](https://www.attrs.org/)|0.008|
|pypi|[Babel](https://pypi.org/project/Babel)|0.008|
|pypi|[backcall](https://pypi.org/project/backcall)|0.008|
|pypi|[bleach](https://pypi.org/project/bleach)|0.008|
|pypi|[cachetools](https://pypi.org/project/cachetools)|0.008|
|pypi|[certifi](https://pypi.org/project/certifi)|0.008|
|pypi|[chardet](https://pypi.org/project/chardet)|0.008|
|pypi|[click](https://pypi.org/project/click)|0.008|
|pypi|[cycler](https://pypi.org/project/cycler)|0.008|
|pypi|[decorator](https://pypi.org/project/decorator)|0.008|
|pypi|[defusedxml](https://pypi.org/project/defusedxml)|0.008|
|pypi|[dnspython](https://pypi.org/project/dnspython)|0.008|
|pypi|[docutils](https://pypi.org/project/docutils)|0.008|
|pypi|[entrypoints](https://pypi.org/project/entrypoints)|0.008|
|pypi|[eventlet](https://pypi.org/project/eventlet)|0.008|
|pypi|[findspark](https://pypi.org/project/findspark)|0.008|
|pypi|[Flask](https://pypi.org/project/Flask)|0.008|
|pypi|[Flask-Login](https://pypi.org/project/Flask-Login)|0.008|
|pypi|[Flask-Session](https://pypi.org/project/Flask-Session)|0.008|
|pypi|[Flask-SocketIO](https://pypi.org/project/Flask-SocketIO)|0.008|
|pypi|[gast](https://pypi.org/project/gast)|0.008|
|pypi|[gmql](https://pypi.org/project/gmql)|0.008|
|pypi|[google-auth](https://pypi.org/project/google-auth)|0.008|
|pypi|[google-auth-oauthlib](https://pypi.org/project/google-auth-oauthlib)|0.008|
|pypi|[google-pasta](https://pypi.org/project/google-pasta)|0.008|
|pypi|[greenlet](https://pypi.org/project/greenlet)|0.008|
|pypi|[grpcio](https://pypi.org/project/grpcio)|0.008|
|pypi|[h5py](https://pypi.org/project/h5py)|0.008|
|pypi|[idna](https://pypi.org/project/idna)|0.008|
|pypi|[imagesize](https://pypi.org/project/imagesize)|0.008|
|pypi|[ipykernel](https://pypi.org/project/ipykernel)|0.008|
|pypi|[ipython](https://pypi.org/project/ipython)|0.008|
|pypi|[ipython-genutils](https://pypi.org/project/ipython-genutils)|0.008|
|pypi|[ipywidgets](https://pypi.org/project/ipywidgets)|0.008|
|pypi|[itsdangerous](https://pypi.org/project/itsdangerous)|0.008|
|pypi|[jedi](https://pypi.org/project/jedi)|0.008|
|pypi|[Jinja2](https://pypi.org/project/Jinja2)|0.008|
|pypi|[joblib](https://pypi.org/project/joblib)|0.008|
|pypi|[jsonschema](https://pypi.org/project/jsonschema)|0.008|
|pypi|[jupyter](https://pypi.org/project/jupyter)|0.008|
|pypi|[jupyter-client](https://pypi.org/project/jupyter-client)|0.008|
|pypi|[jupyter-console](https://pypi.org/project/jupyter-console)|0.008|
|pypi|[jupyter-core](https://pypi.org/project/jupyter-core)|0.008|
|pypi|[Keras-Preprocessing](https://pypi.org/project/Keras-Preprocessing)|0.008|
|pypi|[kiwisolver](https://pypi.org/project/kiwisolver)|0.008|
|pypi|[Markdown](https://pypi.org/project/Markdown)|0.008|
|pypi|[MarkupSafe](https://pypi.org/project/MarkupSafe)|0.008|
|pypi|[matplotlib](https://pypi.org/project/matplotlib)|0.008|
|pypi|[mistune](https://pypi.org/project/mistune)|0.008|
|pypi|[monotonic](https://pypi.org/project/monotonic)|0.008|
|pypi|[nbconvert](https://pypi.org/project/nbconvert)|0.008|
|pypi|[nbformat](https://pypi.org/project/nbformat)|0.008|
|pypi|[networkx](https://pypi.org/project/networkx)|0.008|
|pypi|[notebook](https://pypi.org/project/notebook)|0.008|
|pypi|[numpy](https://pypi.org/project/numpy)|0.008|
|pypi|[oauthlib](https://pypi.org/project/oauthlib)|0.008|
|pypi|[opt-einsum](https://pypi.org/project/opt-einsum)|0.008|
|pypi|[packaging](https://pypi.org/project/packaging)|0.008|
|pypi|[pandas](https://pypi.org/project/pandas)|0.008|
|pypi|[pandocfilters](https://pypi.org/project/pandocfilters)|0.008|
|pypi|[parso](https://pypi.org/project/parso)|0.008|
|pypi|[pexpect](https://pypi.org/project/pexpect)|0.008|
|pypi|[pickleshare](https://pypi.org/project/pickleshare)|0.008|
|pypi|[prometheus-client](https://pypi.org/project/prometheus-client)|0.008|
|pypi|[prompt-toolkit](https://pypi.org/project/prompt-toolkit)|0.008|
|pypi|[protobuf](https://pypi.org/project/protobuf)|0.008|
|pypi|[ptyprocess](https://pypi.org/project/ptyprocess)|0.008|
|pypi|[py4j](https://pypi.org/project/py4j)|0.008|
|pypi|[pyasn1](https://pypi.org/project/pyasn1)|0.008|
|pypi|[pyasn1-modules](https://pypi.org/project/pyasn1-modules)|0.008|
|pypi|[Pygments](https://pypi.org/project/Pygments)|0.008|
|pypi|[pyparsing](https://pypi.org/project/pyparsing)|0.008|
|pypi|[pyrsistent](https://pypi.org/project/pyrsistent)|0.008|
|pypi|[python-dateutil](https://pypi.org/project/python-dateutil)|0.008|
|pypi|[python-engineio](https://pypi.org/project/python-engineio)|0.008|
|pypi|[python-socketio](https://pypi.org/project/python-socketio)|0.008|
|pypi|[pytz](https://pypi.org/project/pytz)|0.008|
|pypi|[pyzmq](https://pypi.org/project/pyzmq)|0.008|
|pypi|[qtconsole](https://pypi.org/project/qtconsole)|0.008|
|pypi|[QtPy](https://pypi.org/project/QtPy)|0.008|
|pypi|[requests](https://pypi.org/project/requests)|0.008|
|pypi|[requests-oauthlib](https://pypi.org/project/requests-oauthlib)|0.008|
|pypi|[requests-toolbelt](https://pypi.org/project/requests-toolbelt)|0.008|
|pypi|[rsa](https://pypi.org/project/rsa)|0.008|
|pypi|[scikit-learn](https://pypi.org/project/scikit-learn)|0.008|
|pypi|[scipy](https://pypi.org/project/scipy)|0.008|
|pypi|[seaborn](https://pypi.org/project/seaborn)|0.008|
|pypi|[Send2Trash](https://pypi.org/project/Send2Trash)|0.008|
|pypi|[sklearn](https://pypi.org/project/sklearn)|0.008|
|pypi|[snfpy](https://pypi.org/project/snfpy)|0.008|
|pypi|[snowballstemmer](https://pypi.org/project/snowballstemmer)|0.008|
|pypi|[Sphinx](https://pypi.org/project/Sphinx)|0.008|
|pypi|[sphinx-rtd-theme](https://pypi.org/project/sphinx-rtd-theme)|0.008|
|pypi|[sphinxcontrib-applehelp](https://pypi.org/project/sphinxcontrib-applehelp)|0.008|
|pypi|[sphinxcontrib-devhelp](https://pypi.org/project/sphinxcontrib-devhelp)|0.008|
|pypi|[sphinxcontrib-htmlhelp](https://pypi.org/project/sphinxcontrib-htmlhelp)|0.008|
|pypi|[sphinxcontrib-jsmath](https://pypi.org/project/sphinxcontrib-jsmath)|0.008|
|pypi|[sphinxcontrib-qthelp](https://pypi.org/project/sphinxcontrib-qthelp)|0.008|
|pypi|[sphinxcontrib-serializinghtml](https://pypi.org/project/sphinxcontrib-serializinghtml)|0.008|
|pypi|[strconv](https://pypi.org/project/strconv)|0.008|
|pypi|[tensorboard](https://pypi.org/project/tensorboard)|0.008|
|pypi|[tensorboard-plugin-wit](https://pypi.org/project/tensorboard-plugin-wit)|0.008|
|pypi|[tensorflow](https://pypi.org/project/tensorflow)|0.008|
|pypi|[tensorflow-estimator](https://pypi.org/project/tensorflow-estimator)|0.008|
|pypi|[termcolor](https://pypi.org/project/termcolor)|0.008|
|pypi|[terminado](https://pypi.org/project/terminado)|0.008|
|pypi|[testpath](https://pypi.org/project/testpath)|0.008|
|pypi|[threadpoolctl](https://pypi.org/project/threadpoolctl)|0.008|
|pypi|[tornado](https://pypi.org/project/tornado)|0.008|
|pypi|[tqdm](https://pypi.org/project/tqdm)|0.008|
|pypi|[traitlets](https://pypi.org/project/traitlets)|0.008|
|pypi|[typecheck-decorator](https://pypi.org/project/typecheck-decorator)|0.008|
|pypi|[typing](https://pypi.org/project/typing)|0.008|
|pypi|[urllib3](https://pypi.org/project/urllib3)|0.008|
|pypi|[wcwidth](https://pypi.org/project/wcwidth)|0.008|
|pypi|[webencodings](https://pypi.org/project/webencodings)|0.008|
|pypi|[Werkzeug](https://pypi.org/project/Werkzeug)|0.008|
|pypi|[widgetsnbextension](https://pypi.org/project/widgetsnbextension)|0.008|
|pypi|[wrapt](https://pypi.org/project/wrapt)|0.008|
|pypi|[wheel](https://pypi.org/project/wheel)|0.004|


> Note that credit values are rounded and expanded (so shared dependencies are represented as one record) and may not add to 1.0. Rounded values that hit zero are removed.

- Generated by [CiteLang](https://github.com/vsoch/citelang)
Binary file added _repos/github/DEIB-GECO/GeneNetFusion/badge.png
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