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gonzalobenegas authored Aug 23, 2022
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Expand Up @@ -15,3 +15,7 @@ Example scripts for different tasks:
- Preparing data: `data/mlm/Snakefile`
- Training: `analysis/mlm/train_512_convnet_only_athaliana.sh`
- Variant effect prediction: `analysis/mlm/run_vep.py`

## Citation
Gonzalo Benegas, Sanjit Singh Batra and Yun S. Song "DNA language models are powerful zero-shot predictors of non-coding variant effects" bioRxiv (2022)
DOI: [10.1101/2022.08.22.504706](https://doi.org/10.1101/2022.08.22.504706)

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