wgd v2: a suite of tools to uncover and date ancient polyploidy and whole-genome duplication

The 2nd Annual American Museum of Natural History Hackathon produced by the BridgeUP: STEM program

palaeoverse: an R package developed by palaeobiologists, for palaeobiologists

R client for the Pangaea database

Open Software for Teaching Evolutionary Biology at Multiple Scales Through Virtual Inquiries

R package for analysing diversity dynamics with fossil occurrences

paleobuddy: an R package for simulating diversification dynamics, fossil records and phylogenies in R.

A Julia interface to the Paleobiology Database (PBDB) data service.

CRAN Task View: Paleontology

Geometric Morphometric Tools for Paleobiology

Leaf Lens for Paleobotanical Interpretability

Semantically remaps the API response from the Paleobiology Database for all taxonomies under Superorder Dinosauria

R package for Stratigraphic Paleobiology

Search fossil occurrences, resolve taxon fossil ranges, plot diversity through deep time, and look up the geologic time scale via MCP. STDIO or Streamable HTTP.

Interactive graphs associated with Fischer et al. 2020. Scientific Reports.

Reconstruction of Pleistocene climate based on assemblages of mammal microfossils from a cave in Hungary

Part of the BSc in Geosciences programme at UU: course materials

Shiny app visualizing the effects of sedimentary condensation

Exploring stromatolite formation through computational growth: process-based models of microbial growth, sediment deposition, environmental forcing and layered structure.