add checks for --fastq_minqual

torognes · Feb 28, 2025 · ff5b0c9 · ff5b0c9
1 parent a120f37
commit ff5b0c9
Showing 1 changed file with 4 additions and 0 deletions.
diff --git a/src/filter.cc b/src/filter.cc
@@ -649,6 +649,10 @@ namespace {
     if (is_negative) {
       fatal("--fastq_truncee_rate cannot be negative");
     }
+
+    if (parameters.opt_fastq_minqual < 0) {
+      fatal("--fastq_minqual cannot be negative");
+    }
   }
 
 }  // end of anonymous namespace