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transmart-gwas-plink

Plink integration for tranSMART

Installation

Add the following entry into "inlinePlugins":

'transmart-gwas-plink': 'transmart-gwas-plink'

and the following entry into "InternalDependenciesFilter":

compile ":transmart-gwas-plink:$transmartVersion"

in file "DependencyManagement.groovy"

Usage

See wiki: https://github.com/ThomsonReuters-LSPS/transmart-gwas-plink/wiki

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Plink integration for tranSMART

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  • Groovy 84.5%
  • JavaScript 15.5%