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Releases: wen-chen/GCEN

v0.6.3

07 Mar 02:18
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  1. Added calculate_accuracy to calculate the accuracy of prediction;
  2. The program network_stat added two statistics: degree centrality and network heterogeneity;
  3. Performance of program annotate was improved;
  4. Fix some minor bugs.

v0.6.2

09 Feb 15:46
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  1. Added network_stat to calculate the statistics of network.

v0.6.1

26 Jan 15:21
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  1. Added network_extract to extract subnetwork based on a gene list;
  2. Added network_shuffle to random shuffle network with degree preserving;
  3. Fix some bugs.

v0.6.0

06 Jan 16:02
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  1. Added two programs csv_to_tsv and tsv_to_csv for converting tsv and csv files to each other;
  2. The program data_norm adds an normalization method based housekeeping genes;
  3. The program network_build add a new parameter -a/--all for output all edges without any cutoff;
  4. Fix some bugs.

v0.5.2

30 Sep 09:49
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  1. Support download via bioconda;
  2. Use ghc::filesystem instead of std::filesystem for the cross-platform compatibility.

v0.5.1

27 Feb 08:18
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  1. Use robin_hood::unordered_map instead of std::unordered_map for performance improvement;
  2. The program rwr adds support for the weights and direction of the network;
  3. The program data_norm adds support for the trimmed mean of M-values (TMM) algorithm;
  4. The program data_filter adds support for filter based on a percentage (i.e. keep 75% of total genes).