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10x Genomics

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https://10xgenomics.com
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cellranger cellranger Public

10x Genomics Single Cell Analysis

Rust 434 101
loupeR loupeR Public

Convert Seurat objects to 10x Genomics Loupe files.

R 141 16
spaceranger spaceranger Public

Rust 14 2

Repositories

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Showing 10 of 75 repositories

txg-mcp Public

10XGenomics/txg-mcp’s past year of commit activity

TypeScript 0 MIT 0 0 2 Updated Oct 16, 2025
bamtofastq Public
Convert 10x BAM files to the original FASTQs compatible with 10x pipelines

10XGenomics/bamtofastq’s past year of commit activity

Rust 66 MIT 7 17 4 Updated Oct 13, 2025
orbit Public
Rust wrapper for STAR aligner

10XGenomics/orbit’s past year of commit activity

C 18 MIT 4 0 4 Updated Oct 13, 2025
spatialdata-io Public Forked from scverse/spatialdata-io

10XGenomics/spatialdata-io’s past year of commit activity

Python 3 BSD-3-Clause 47 0 0 Updated Oct 13, 2025
analysis_guides Public
10x Genomics analysis guides files

10XGenomics/analysis_guides’s past year of commit activity

Jupyter Notebook 19 14 1 0 Updated Oct 9, 2025
intel-mkl-src Public Forked from rust-math/intel-mkl-src
Redistribute Intel MKL as a crate

10XGenomics/intel-mkl-src’s past year of commit activity

Rust 1 25 0 5 Updated Oct 6, 2025
FIt-SNE Public Forked from KlugerLab/FIt-SNE
Fast Fourier Transform-accelerated Interpolation-based t-SNE (FIt-SNE)

10XGenomics/FIt-SNE’s past year of commit activity

C++ 0 116 0 1 Updated Sep 24, 2025
hdf5-rust Public Forked from aldanor/hdf5-rust
HDF5 for Rust

10XGenomics/hdf5-rust’s past year of commit activity

Rust 0 Apache-2.0 100 0 1 Updated Sep 22, 2025
rust-shardio Public
Out-of-memory sorting of large datasets map / reduce style processing

10XGenomics/rust-shardio’s past year of commit activity

Rust 46 MIT 4 3 3 Updated Sep 18, 2025
rules_conda Public
Bazel rules for creating conda environments

10XGenomics/rules_conda’s past year of commit activity

Go 6 MIT 1 3 4 Updated Sep 8, 2025

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