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first commit letting just the linters to work just focusing on the ch… #2346

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first commit letting just the linters to work just focusing on the ch…

first commit letting just the linters to work just focusing on the ch… #2346

Workflow file for this run

.github/workflows/ci.yaml at 6feb601
#name: CI
#
#on:
# pull_request:
# workflow_dispatch:
# push:
# branches:
# - main
# - master
#permissions:
# contents: read
#
#jobs:
# # lint: # Turn on when linting issues are resolved
# # runs-on: ubuntu-latest
# # timeout-minutes: 2
#
# # steps:
# # - name: Checkout code
# # uses: actions/checkout@v5
#
# # - name: Set up Python
# # uses: actions/setup-python@v6
# # with:
# # python-version: "3.9"
#
# # - name: Install dependencies
# # run: |
# # python -m pip install --upgrade pip
# # pip install -e .[all]
#
# # - name: Lint code
# # run: |
# # ruff check .
#
# test:
# # needs: lint
# runs-on: ubuntu-latest
# timeout-minutes: 10
#
# strategy:
# matrix:
# python-version: ["3.9", "3.10", "3.11", "3.12"]
#
# steps:
# - name: Checkout code
# uses: actions/checkout@v5
#
# - name: Set up Python
# uses: actions/setup-python@v6
# with:
# python-version: ${{ matrix.python-version }}
#
# - name: Install system dependencies
# run: sudo apt-get install -y graphviz rsync curl
#
# - name: Install dependencies
# run: |
# python -m pip install --upgrade pip packaging setuptools twine
# pip install --upgrade -e .[all]
#
# - name: Unit tests
# run: |
# pytest \
# --cov=autosubmit --cov-config=.coveragerc \
# --cov-report=xml:test/coverage.xml --cov-append \
# test/unit
#
# - name: Coverage report
# run: |
# coverage xml
# coverage report
#
# - name: Upload coverage artifact
# uses: actions/upload-artifact@v4
# with:
# name: coverage_unit_py-${{ matrix.python-version }}
# path: coverage.xml
# retention-days: 7
#
# test-integration:
# runs-on: ubuntu-latest
# timeout-minutes: 10
#
# strategy:
# matrix:
# python-version: ["3.9", "3.10", "3.11", "3.12"]
#
# steps:
# - name: Checkout code
# uses: actions/checkout@v5
#
# - name: Set up Python
# uses: actions/setup-python@v6
# with:
# python-version: ${{ matrix.python-version }}
#
# - name: Install system dependencies
# run: sudo apt-get install -y curl git graphviz rsync
#
# - name: Install dependencies
# run: |
# python -m pip install --upgrade pip packaging setuptools twine
# pip install --upgrade -e .[all]
#
# - name: Set up Git
# run: |
# # From: https://stackoverflow.com/questions/62960533/how-to-use-git-commands-during-a-github-action
# # Set up dummy configuration for integration tests.
# git --version
# git config --global user.email "[email protected]"
# git config --global user.name "GitHub Actions"
#
# # In GitHub Actions we run all the integration tests, including those that require
# # dependencies such as Docker (see `-m ''`, which means all markers). Read the
# # CONTRIBUTING.md file for details how to set up your environment to run these.
# - name: Integration tests
# run: |
# pytest \
# --cov=autosubmit --cov-config=.coveragerc \
# --cov-report=xml:test/coverage.xml --cov-append \
# test/integration \
# -m 'not slurm'
#
# - name: Coverage report
# run: |
# coverage xml
# coverage report
#
# - name: Upload coverage artifact
# uses: actions/upload-artifact@v4
# with:
# name: coverage_integration_py-${{ matrix.python-version }}
# path: coverage.xml
# retention-days: 7
#
# test-regression:
# runs-on: ubuntu-latest
# timeout-minutes: 10
#
# strategy:
# matrix:
# python-version: ["3.9", "3.10", "3.11", "3.12"]
#
# steps:
# - name: Checkout code
# uses: actions/checkout@v5
#
# - name: Set up Python
# uses: actions/setup-python@v6
# with:
# python-version: ${{ matrix.python-version }}
#
# - name: Install system dependencies
# run: sudo apt-get install -y curl graphviz rsync
#
# - name: Install dependencies
# run: |
# python -m pip install --upgrade pip packaging setuptools twine
# pip install --upgrade -e .[all]
#
# # Run regression tests
# - name: Regression tests
# run: |
# pytest \
# --cov=autosubmit --cov-config=.coveragerc \
# --cov-report=xml:test/coverage.xml --cov-append \
# test/regression \
# -m ''
#
# - name: Coverage report
# run: |
# coverage xml
# coverage report
#
# - name: Upload coverage artifact
# uses: actions/upload-artifact@v4
# with:
# name: coverage_regression_py-${{ matrix.python-version }}
# path: coverage.xml
# retention-days: 7
#
# test-slurm:
# runs-on: ubuntu-latest
#
# strategy:
# matrix:
# python-version: ["3.9"]
#
# steps:
# - name: Checkout repository
# uses: actions/checkout@v5
#
# - name: Set up Python
# uses: actions/setup-python@v6
# with:
# python-version: ${{ matrix.python-version }}
#
# - name: Install system dependencies
# run: sudo apt-get install -y curl git graphviz rsync
#
# - name: Install dependencies
# run: |
# python -m pip install --upgrade pip packaging
# pip install --upgrade -e .[all]
#
# - name: Set up Git
# run: |
# # From: https://stackoverflow.com/questions/62960533/how-to-use-git-commands-during-a-github-action
# # Set up dummy configuration for integration tests.
# git --version
# git config --global user.email "[email protected]"
# git config --global user.name "GitHub Actions"
#
# - name: Integration tests
# run: |
# pytest \
# --cov=autosubmit --cov-config=.coveragerc \
# --cov-report=xml:test/coverage.xml --cov-append \
# test/integration \
# --capture=no \
# -m 'slurm'
#
# - name: Coverage report
# run: |
# coverage xml
# coverage report
#
# - name: Upload coverage artifact
# uses: actions/upload-artifact@v4
# with:
# name: coverage_slurm_py-${{ matrix.python-version }}
# path: coverage.xml
# retention-days: 7
#
# # NOTE: The docs are already built on ReadTheDocs. We perform another quick build,Add commentMore actions
# # without checking or deploying the produced HTML, just to i) verify that
# # we can build it and ii) collect the coverage of the examples executed.
# test-docs:
# runs-on: ubuntu-latest
# timeout-minutes: 10
#
# strategy:
# matrix:
# python-version: [ "3.9" ]
#
# steps:
# - name: Checkout code
# uses: actions/checkout@v5
#
# - name: Set up Python
# uses: actions/setup-python@v6
# with:
# python-version: ${{ matrix.python-version }}
#
# - name: Install system dependencies
# run: sudo apt-get install -y curl graphviz rsync
#
# - name: Install dependencies
# run: |
# python -m pip install --upgrade pip packaging setuptools twine
# pip install --upgrade -e .[all]
#
# # Run regression tests
# - name: Build docs
# run: |
# cd docs && make xml_coverage
#
# - name: Coverage report
# run: |
# cd docs
# coverage xml
# coverage report
#
# - name: Upload coverage artifact
# uses: actions/upload-artifact@v4
# with:
# name: coverage_docs-${{ matrix.python-version }}
# path: docs/coverage.xml
# retention-days: 7
#
# test-misc:
# runs-on: ubuntu-latest
# timeout-minutes: 5
#
# strategy:
# matrix:
# python-version: [ "3.10" ]
#
# steps:
# - name: Checkout code
# uses: actions/checkout@v5
#
# - name: Set up Python
# uses: actions/setup-python@v6
# with:
# python-version: ${{ matrix.python-version }}
#
# - name: Install dependencies
# run: |
# python -m pip install --upgrade pip packaging setuptools twine
# # To validate CFF citation files.
# python -m pip install cffconvert
#
# - name: Validate citation file
# run: |
# cffconvert --validate -i CITATION.cff
#
# coverage:
# needs: [test, test-integration, test-regression, test-slurm, test-docs]
# runs-on: ubuntu-latest
# timeout-minutes: 2
# steps:
# - name: Checkout
# uses: actions/checkout@v5
#
# - name: Download coverage artifacts
# uses: actions/download-artifact@v5
#
# - name: Codecov upload
# uses: codecov/codecov-action@v5
# with:
# name: ${{ github.workflow }}
# flags: fast-tests
# fail_ci_if_error: true
# verbose: true
# # Token not required for public repos, but avoids upload failure due
# # to rate-limiting (but not for PRs opened from forks)
# token: ${{ secrets.CODECOV_TOKEN }}