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@FINNGEN

FINNGEN

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  1. finemapping-pipeline finemapping-pipeline Public

    Statistical fine-mapping pipeline in FinnGen

    WDL 29 9

  2. saige-pipelines saige-pipelines Public

    WDL 16 6

  3. CS-PRS-pipeline CS-PRS-pipeline Public

    PRS pipeline using PRS_CS

    Python 13

  4. META_ANALYSIS META_ANALYSIS Public

    Tools for doing x way meta-analysis

    Python 9 14

  5. pheweb pheweb Public

    Forked from statgen/pheweb

    A tool to build multi-phenotype GWAS browsers

    Python 8 2

  6. regenie-pipelines regenie-pipelines Public

    WDL pipelines for running regenie

    WDL 8 4

Repositories

Showing 10 of 74 repositories
  • risteys Public
    FINNGEN/risteys’s past year of commit activity
    Elixir 5 MIT 0 74 0 Updated Mar 13, 2025
  • coloc.susie.direct Public

    Colocalization on Susie results from FinnGen fine-mapping pipeline

    FINNGEN/coloc.susie.direct’s past year of commit activity
    R 1 0 0 0 Updated Mar 12, 2025
  • pca_kinship Public

    PCA & Kinship pipeline

    FINNGEN/pca_kinship’s past year of commit activity
    Python 2 MIT 0 0 0 Updated Mar 12, 2025
  • ROMOPAPI Public

    ROMOPAPI

    FINNGEN/ROMOPAPI’s past year of commit activity
    R 0 0 0 0 Updated Mar 12, 2025
  • HadesExtras Public

    HadesExtras

    FINNGEN/HadesExtras’s past year of commit activity
    R 0 0 3 0 Updated Mar 12, 2025
  • pheweb Public Forked from statgen/pheweb

    A tool to build multi-phenotype GWAS browsers

    FINNGEN/pheweb’s past year of commit activity
    Python 8 MIT 69 47 4 Updated Mar 11, 2025
  • kanta_lab_preprocessing Public

    Repo for kanta lab QC

    FINNGEN/kanta_lab_preprocessing’s past year of commit activity
    Python 1 MIT 0 1 0 Updated Mar 7, 2025
  • CO2AnalysisModules Public
    FINNGEN/CO2AnalysisModules’s past year of commit activity
    R 0 0 12 1 Updated Mar 6, 2025
  • META_ANALYSIS Public

    Tools for doing x way meta-analysis

    FINNGEN/META_ANALYSIS’s past year of commit activity
    Python 9 MIT 14 5 3 Updated Mar 5, 2025
  • qc_imputation Public

    Genotype QC and imputation pipeline

    FINNGEN/qc_imputation’s past year of commit activity
    WDL 2 MIT 0 12 2 Updated Mar 5, 2025
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