The files in thisdirectory are: (A) C++ source code for running kinetic PDMP Monte Carlo simulation for generating exact distributions of the PDMP stem cell genetic network. (B) SBML and BNGL files for numerically implementing individual based model of the pluripotency network.
See the accompanying paper for more detail: "A stochastic and dynamical view of pluripotency in mouse embryonic stem cells" by YT Lin, PG Hufton, EY Lee and DA Potoyan PLoS Comp Bio (2018) 14, 1006000 https://doi.org/10.1371/journal.pcbi.1006000