Distinguish sample type (https://github.com/emo-bon/emobon-ontology/i…

…ssues/7, https://github.com/emo-bon/emobon-ontology/issues/19)
emo-bon · Oct 21, 2024 · 32ae7eb · 32ae7eb
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commit 32ae7eb
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Showing 2 changed files with 14 additions and 2 deletions.
diff --git a/templates/sediment_sampling.ldt.ttl.j2 b/templates/sediment_sampling.ldt.ttl.j2
@@ -118,8 +118,14 @@ Sets:
     {%- if _.ENA_accession_number_sample != "NA" %}
     emobon-sampling:enaSampleAccNum {{_.ENA_accession_number_sample | xsd("anyURI") | safe }} ;
     {%- endif %}
-    {%- if _.replicate != "NA" %}
+    {%- if _.replicate != "NA" %} {#distinguishing between replicate type (emobon-ontology #7) #}
+        {%- if _.replicate == "blank" %}
+    schema:additionalType "blank sample"^^xsd:string ;
     emobon-sampling:sampleReplicate {{ _.replicate | xsd("string") | safe }} ;
+        {%- else %}
+    schema:additionalType "http://vocab.nerc.ac.uk/collection/P01/current/IDTCRE01/"^^anyURI ;
+    emobon-sampling:sampleReplicate {{ _.replicate | xsd("string") | safe }} ;
+        {%- endif %}
     {%- endif %}
     {%- if _.long_store == "Y" %}
     emobon-sampling:longStorage 'true'^^xsd:boolean ; 

diff --git a/templates/water_sampling.ldt.ttl.j2 b/templates/water_sampling.ldt.ttl.j2
@@ -116,8 +116,14 @@ Sets:
     {%- if _.ENA_accession_number_sample != "NA" %}
     emobon-sampling:enaSampleAccNum {{_.ENA_accession_number_sample | xsd("anyURI") | safe }} ;
     {%- endif %}
-    {%- if _.replicate != "NA" %}
+    {%- if _.replicate != "NA" %} {#distinguishing between replicate type (emobon-ontology #7) #}
+        {%- if _.replicate == "blank" %}
+    schema:additionalType "blank sample" ;
     emobon-sampling:sampleReplicate {{ _.replicate | xsd("string") | safe }} ;
+        {%- else %}
+    schema:additionalType "http://vocab.nerc.ac.uk/collection/P01/current/IDTCRE01/"^^anyURI ;
+    emobon-sampling:sampleReplicate {{ _.replicate | xsd("string") | safe }} ;
+        {%- endif %}
     {%- endif %}
     {%- if _.long_store == "Y" %}
     emobon-sampling:longStorage 'true'^^xsd:boolean ;