Code

Run hostile offline#399

Code

Merged

ryanjameskennedy merged 13 commits intomastergenomic-medicine-sweden/jasen:masterfrom run-hostile-offlinegenomic-medicine-sweden/jasen:run-hostile-offlineCopy head branch name to clipboardFeb 18, 2025

+288-48

Commits

Commits on Feb 12, 2025

• Add --airplane arg to hostile

  ryanjameskennedy

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  50612a0

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• Add hostileIdx arg to config

  ryanjameskennedy

  committed
  8f577eb

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Commits on Feb 13, 2025

• Change hostileIdx path

  ryanjameskennedy

  committed
  bb92f8c

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• Prepare Makefile for when sif can be used for image download

  ryanjameskennedy

  committed
  567101c

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• Add script to download hostile idx

  ryanjameskennedy

  committed
  56c9632

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• Fix hostile ext.args in configs

  ryanjameskennedy

  committed
  18a0b1c

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• Fix profile overwriting error

  ryanjameskennedy

  committed
  9468cca

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• Fix strep workflow bug

  ryanjameskennedy

  committed
  cffdcf0

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Commits on Feb 17, 2025

• Update Makefile to manually download hostile index files

  ryanjameskennedy

  committed
  7cf05b8

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• Merge master into run-hostile-offline & resolve CHANGELOG conflict

  ryanjameskennedy

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  68cf842

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• Rm hostile script for user index download

  ryanjameskennedy

  committed
  2638498

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Commits on Feb 18, 2025

• Add sw info for workflow species

  ryanjameskennedy

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  5428fa3

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• Fix spelling error

  ryanjameskennedy

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  b7d6b69

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