CI #4074
corneliusroemerci.yaml
on: schedule
Matrix: pytest-cram
mypy
53s
pyright
18s
build-docs
/
build
2m 10s
check-docs
41s
check-subsample-config-schema
55s
Matrix: pathogen-repo-ci-v0
Matrix: pathogen-repo-ci
codecov
19s
rebuild-docker-image
Annotations
19 warnings
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pyright
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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mypy
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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check-subsample-config-schema
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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pathogen-repo-ci-v0 (rsv)
Failed to save: Unable to reserve cache with key 2025-11-20-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci-v0 (avian-flu)
Failed to save: Unable to reserve cache with key 2025-11-20-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci-v0 (seasonal-flu)
Failed to save: Unable to reserve cache with key 2025-11-20-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci-v0 (ncov)
Failed to save: Unable to reserve cache with key 2025-11-20-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (lassa)
Failed to save: Unable to reserve cache with key 2025-11-20-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (mumps)
Failed to save: Unable to reserve cache with key 2025-11-20-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (dengue)
Failed to save: Unable to reserve cache with key 2025-11-20-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci-v0 (vcf-input-tutorial)
Failed to save: Unable to reserve cache with key 2025-11-20-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (wnv)
Failed to save: Unable to reserve cache with key 2025-11-20-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (mpox)
Failed to save: Unable to reserve cache with key 2025-11-20-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (measles)
Failed to save: Unable to reserve cache with key 2025-11-20-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (zika)
Failed to save: Unable to reserve cache with key 2025-11-20-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (oropouche)
Failed to save: Unable to reserve cache with key 2025-11-20-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (seasonal-cov)
Failed to save: Unable to reserve cache with key 2025-11-20-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (rabies)
Failed to save: Unable to reserve cache with key 2025-11-20-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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codecov
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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Artifacts
Produced during runtime
| Name | Size | Digest | |
|---|---|---|---|
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coverage
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192 KB |
sha256:facae3a750d96bb8328b945c91bbda950187884ae7701ab3a9c25d74bc48642f
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output-avian-flu
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108 KB |
sha256:8b21cc3cc54b025bf0b5ad321560727abca38401fafbccb1d01ef64613e12121
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output-dengue
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436 KB |
sha256:7e58564d2be59b9ef47c58d39dd7de0d0fe6b3854dc0869acddf20356fe8370f
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output-lassa
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369 KB |
sha256:2ee539fb50691d9aa5c6b3daa81b349393275f47797e11578691cb20cef6df17
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output-measles
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3.92 MB |
sha256:51c4e03f02b94511384ee366c090bf185002e2ee977a81e572e4c207418b9cfe
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output-mpox
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23.1 MB |
sha256:51c734f1e27cf3be9a9f29d5e74104bbc3de55e068f2420e20d5873b263d3965
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output-mumps
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378 KB |
sha256:78e11c7100c1f624d8802227e407fde2a2a637fa86733693b457a811c5032a40
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output-ncov
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714 KB |
sha256:501b9d364b780cd112d56b13d7d30de29758246d437b0a55ff66b7249ecf7c93
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output-oropouche
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588 KB |
sha256:9ebcfca516a531667038e0da54ddc247c242aebb680fa93687f93bc61ccf7d1e
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output-rabies
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5.3 MB |
sha256:fbe7970039903e03fa548f945ca36d5ca5df6287754e7629ebe742e8fd4cc58f
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output-rsv
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662 KB |
sha256:679466ec7e38858edfee845acf4df1e3c61d360d9167faa2c0d26a1f8892e6dd
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output-seasonal-cov
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2.51 MB |
sha256:cd370f81c9403e768e5119921c363bdb415211b63cda070a74e40e06ecbb3fda
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output-seasonal-flu
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60.4 KB |
sha256:84773158c48bdc7c2723b1e2508a52db83864fcc357d863c21d79a2c788a1bb9
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output-vcf-input-tutorial
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5.03 MB |
sha256:ad35d9f6b8cd04767f158b6f85b31494521c16641f99d7ac8439d9da0fd23fc4
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output-wnv
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241 KB |
sha256:d11fba72999a3dac9c6fbd6973b5ebe6adde0f09d96f30a1c41b628f8e9103ec
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output-yellow-fever
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2.11 MB |
sha256:e8acd757fc5b187cf3893281309e90a077c06c8f0b1cb5ccefadaae558b07aba
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output-zika
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838 KB |
sha256:86b59fcb390e2df2896723ae90ef391239d9e0824db54e8d68578de72d15892d
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