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22.2.0

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@github-actions github-actions released this 31 Jul 19:04

These release notes are automatically extracted from the full changelog.

Features

  • Adds a new sub-command augur curate titlecase. The titlecase command is intended to apply titlecase to string fields in a metadata record (e.g. BRAINE-LE-COMTE, FRANCE -> Braine-le-Comte, France). Previously, this was available in the transform-string-fields script within the monkeypox repo.
    #1197 (@j23414 and @joverlee521)

Bug fixes

  • export v2: Previously, when strain was not used as the metadata ID column, node attributes might have gone missing from the final Auspice JSON. This has been fixed. #1260, #1262 (@victorlin, @joverlee521)
  • export v1: Added a deprecation warning for this command. #1265 (@victorlin)
  • export v1: The recently introduced flag --metadata-id-columns did not work properly due to the same export v2 bug that was fixed in this release. Instead of fixing it in export v1, drop the broken feature since this command is no longer being maintained. #1265 (@victorlin)
  • filter: Expose internal Pandas errors from --query which may be useful to users. #1267 (@victorlin)
  • filter: Previously, --query would fail when numerical comparisons were used on columns with missing values. This has been fixed. #1269 (@victorlin)