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nextstrain / nextclade Public

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refactor: private aa mutation groups#1481

Merged

ivan-aksamentov merged 8 commits intomasternextstrain/nextclade:masterfrom refactor/private-aa-mutation-groupsnextstrain/nextclade:refactor/private-aa-mutation-groupsCopy head branch name to clipboard

Jun 6, 2024

+655-442

Conversation Commits8 (8)Checks Files changed

Commits

Commits on Jun 5, 2024

refactor: split "find aa changes" code into modules
ivan-aksamentov
committed
refactor: extract aa alignment pair to a struct
ivan-aksamentov
committed

Commits on Jun 6, 2024

refactor: move position-based checks into the new aa alignment class
ivan-aksamentov
committed
refactor: split aa mut search and grouping loops
ivan-aksamentov
committed
refactor: factor out aa changes grouping into a new function
ivan-aksamentov
committed
refactor: hoist AaAlignment contruction
ivan-aksamentov
committed
refactor: rename function to make it more generic
ivan-aksamentov
committed
refactor: extract nuc alignment pair to a struct
ivan-aksamentov
committed

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