1.1.0

Nextclade Web 1.3.0, Nextclade CLI 1.1.0, Nextalign CLI 1.1.0 (2021-06-22)

This series of releases adds the new output file, nextclade.errors.csv for all tools and adds the file nextclade.insertions.csv to Nextclade Web (this file was already available for users of CLI tools).

nextclade.insertions.csv contains the following columns: seqName, insertions. The column insertions contains a list of nucleotide insertion entries delimited by semicolon. Each entry consists of the position of the first nucleotide and the inserted fragment, delimited by colon.

nextclade.errors.csv: includes columns seqName, errors, warnings, failedGenes, which contains list of errors, list of warnings and list of genes that failed processing. All lists are semicolon-delimited.

In both files, each row corresponds to one sequence, named by seqName.