Improve ped handling #775
nvnieuwkAnnotations
47 errors and 38 warnings
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Run nf-test with input_split_bedtools-23.10.0
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
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Run nf-test with cram_prepare_samtools_bedtools-23.10.0
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
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Run nf-test with vcf_ped_rtgtools-23.10.0
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
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Run nf-test with vcf_extract_relate_somalier-23.10.0
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
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Run nf-test with vcf_upd_updio-23.10.0
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
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Run nf-test with vcf_annotation-23.10.0
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
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Run nf-test with cram_call_vardictjava-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
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Run nf-test with cram_prepare_samtools_bedtools-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
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Run nf-test with input_split_bedtools-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
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Run nf-test with vcf_validate_small_variants-23.10.0
Canceling since a higher priority waiting request for 'nf-core CI-185' exists
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Run nf-test with vcf_validate_small_variants-23.10.0
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
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Run nf-test with pipeline_variations-latest-everything
Canceling since a higher priority waiting request for 'nf-core CI-185' exists
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Run nf-test with pipeline_variations-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
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Run nf-test with pipeline_callers-23.10.0
Canceling since a higher priority waiting request for 'nf-core CI-185' exists
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Run nf-test with pipeline_callers-23.10.0
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
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Run nf-test with cram_call_genotype_gatk4-23.10.0
Canceling since a higher priority waiting request for 'nf-core CI-185' exists
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Run nf-test with cram_call_genotype_gatk4-23.10.0
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
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Run nf-test with cram_call_vardictjava-23.10.0
Canceling since a higher priority waiting request for 'nf-core CI-185' exists
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Run nf-test with cram_call_vardictjava-23.10.0
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
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Run nf-test with pipeline_gvcfs-23.10.0
Canceling since a higher priority waiting request for 'nf-core CI-185' exists
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Run nf-test with pipeline_gvcfs-23.10.0
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
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Run nf-test with pipeline_default-23.10.0
Canceling since a higher priority waiting request for 'nf-core CI-185' exists
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Run nf-test with pipeline_default-23.10.0
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
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Run nf-test with pipeline_gvcfs-latest-everything
Canceling since a higher priority waiting request for 'nf-core CI-185' exists
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Run nf-test with pipeline_gvcfs-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
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Run nf-test with pipeline_variations2-latest-everything
Canceling since a higher priority waiting request for 'nf-core CI-185' exists
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Run nf-test with pipeline_variations2-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
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Run nf-test with vcf_validate_small_variants-latest-everything
Canceling since a higher priority waiting request for 'nf-core CI-185' exists
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Run nf-test with vcf_validate_small_variants-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
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Run nf-test with cram_call_genotype_gatk4-latest-everything
Canceling since a higher priority waiting request for 'nf-core CI-185' exists
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Run nf-test with cram_call_genotype_gatk4-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
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Run nf-test with pipeline_variations2-23.10.0
Canceling since a higher priority waiting request for 'nf-core CI-185' exists
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Run nf-test with pipeline_variations2-23.10.0
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
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Run nf-test with vcf_upd_updio-latest-everything
Canceling since a higher priority waiting request for 'nf-core CI-185' exists
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Run nf-test with vcf_upd_updio-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
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Run nf-test with pipeline_callers-latest-everything
Canceling since a higher priority waiting request for 'nf-core CI-185' exists
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Run nf-test with vcf_ped_rtgtools-latest-everything
Canceling since a higher priority waiting request for 'nf-core CI-185' exists
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Run nf-test with pipeline_callers-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
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Run nf-test with vcf_ped_rtgtools-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
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Run nf-test with pipeline_default-latest-everything
Canceling since a higher priority waiting request for 'nf-core CI-185' exists
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Run nf-test with pipeline_default-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
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Run nf-test with vcf_annotation-latest-everything
Canceling since a higher priority waiting request for 'nf-core CI-185' exists
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Run nf-test with vcf_annotation-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
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Run nf-test with pipeline_variations-23.10.0
Canceling since a higher priority waiting request for 'nf-core CI-185' exists
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Run nf-test with pipeline_variations-23.10.0
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
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Run nf-test with vcf_extract_relate_somalier-latest-everything
Canceling since a higher priority waiting request for 'nf-core CI-185' exists
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Run nf-test with vcf_extract_relate_somalier-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
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Run nf-test with input_split_bedtools-23.10.0
The following actions uses Node.js version which is deprecated and will be forced to run on node20: mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
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Run nf-test with input_split_bedtools-23.10.0
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
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Run nf-test with cram_prepare_samtools_bedtools-23.10.0
The following actions uses Node.js version which is deprecated and will be forced to run on node20: mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
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Run nf-test with vcf_ped_rtgtools-23.10.0
The following actions uses Node.js version which is deprecated and will be forced to run on node20: mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
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Run nf-test with vcf_extract_relate_somalier-23.10.0
The following actions uses Node.js version which is deprecated and will be forced to run on node20: mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
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Run nf-test with cram_prepare_samtools_bedtools-23.10.0
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
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Run nf-test with vcf_ped_rtgtools-23.10.0
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
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Run nf-test with vcf_extract_relate_somalier-23.10.0
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
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Run nf-test with vcf_upd_updio-23.10.0
The following actions uses Node.js version which is deprecated and will be forced to run on node20: mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
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Run nf-test with vcf_upd_updio-23.10.0
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
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Run nf-test with vcf_annotation-23.10.0
The following actions uses Node.js version which is deprecated and will be forced to run on node20: mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
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Run nf-test with vcf_annotation-23.10.0
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
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Run nf-test with cram_call_vardictjava-latest-everything
The following actions uses Node.js version which is deprecated and will be forced to run on node20: mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
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Run nf-test with cram_call_vardictjava-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
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Run nf-test with cram_prepare_samtools_bedtools-latest-everything
The following actions uses Node.js version which is deprecated and will be forced to run on node20: mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
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Run nf-test with cram_prepare_samtools_bedtools-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
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Run nf-test with input_split_bedtools-latest-everything
The following actions uses Node.js version which is deprecated and will be forced to run on node20: mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
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Run nf-test with input_split_bedtools-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
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Run nf-test with vcf_validate_small_variants-23.10.0
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
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Run nf-test with pipeline_variations-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
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Run nf-test with pipeline_callers-23.10.0
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
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Run nf-test with cram_call_genotype_gatk4-23.10.0
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
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Run nf-test with cram_call_vardictjava-23.10.0
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
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Run nf-test with pipeline_gvcfs-23.10.0
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
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Run nf-test with pipeline_default-23.10.0
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
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Run nf-test with pipeline_gvcfs-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
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Run nf-test with pipeline_variations2-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
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Run nf-test with vcf_validate_small_variants-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
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Run nf-test with cram_call_genotype_gatk4-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
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Run nf-test with pipeline_variations2-23.10.0
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
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Run nf-test with vcf_upd_updio-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
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Run nf-test with pipeline_callers-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
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Run nf-test with vcf_ped_rtgtools-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
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Run nf-test with pipeline_default-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
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Run nf-test with vcf_annotation-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
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Run nf-test with pipeline_variations-23.10.0
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
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Run nf-test with vcf_extract_relate_somalier-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
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Deprecation notice: v1, v2, and v3 of the artifact actions
The following artifacts were uploaded using a version of actions/upload-artifact that is scheduled for deprecation: "nf-test-workdir".
Please update your workflow to use v4 of the artifact actions.
Learn more: https://github.blog/changelog/2024-04-16-deprecation-notice-v3-of-the-artifact-actions/
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Artifacts
Produced during runtime
| Name | Size | |
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nf-test-workdir
Expired
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651 MB |
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