Only IBA-to-exp qual exact match equals agreement - issue #39

pantherdb · Dec 31, 2019 · 4e0bbfa · 4e0bbfa
1 parent 0978844
commit 4e0bbfa
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/scripts/createGAF.pl b/scripts/createGAF.pl
@@ -491,7 +491,7 @@
             if (defined $exp_qualifier{$gene} && defined $exp_qualifier{$gene}{$go}){
                 foreach my $ev_id (keys %{$exp_qualifier{$gene}{$go}}){
                     foreach my $exp_qual (keys %{$exp_qualifier{$gene}{$go}{$ev_id}}){
-                        if ((exists($positive_quals{$exp_qual}) && exists($positive_quals{$qual})) || (exists($negative_quals{$exp_qual}) && exists($negative_quals{$qual}))) {
+                        if ($qual eq $exp_qual) {
                             # IBA qualifier is valid if agreement w/ any same-term experimental annotation qualifier
                             $qual_supported=1;
                         }